Protein–RNA interactions for Protein: P06028

GYPB, Glycophorin-B, humanhuman

Predictions only

Length 91 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GYPBP06028 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.6■□□□□ 0.57
GYPBP06028 AC106739.1-201ENST00000617035 715 ntBASIC18.6■□□□□ 0.57
GYPBP06028 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GYPBP06028 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GYPBP06028 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
GYPBP06028 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
GYPBP06028 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.6■□□□□ 0.57
GYPBP06028 AC027702.1-201ENST00000563810 1770 ntBASIC18.6■□□□□ 0.57
GYPBP06028 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.6■□□□□ 0.57
GYPBP06028 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GYPBP06028 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
GYPBP06028 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.6■□□□□ 0.57
GYPBP06028 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
GYPBP06028 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
GYPBP06028 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GYPBP06028 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GYPBP06028 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GYPBP06028 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.59■□□□□ 0.57
GYPBP06028 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.59■□□□□ 0.57
GYPBP06028 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.59■□□□□ 0.57
GYPBP06028 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.59■□□□□ 0.57
GYPBP06028 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
GYPBP06028 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
GYPBP06028 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GYPBP06028 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GYPBP06028 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
GYPBP06028 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GYPBP06028 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GYPBP06028 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
GYPBP06028 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GYPBP06028 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GYPBP06028 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.58■□□□□ 0.57
GYPBP06028 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.58■□□□□ 0.57
GYPBP06028 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.58■□□□□ 0.57
GYPBP06028 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
GYPBP06028 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
GYPBP06028 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.58■□□□□ 0.56
GYPBP06028 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
GYPBP06028 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.58■□□□□ 0.56
GYPBP06028 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.58■□□□□ 0.56
GYPBP06028 AF213884.3-201ENST00000563833 479 ntBASIC18.58■□□□□ 0.56
GYPBP06028 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.58■□□□□ 0.56
GYPBP06028 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GYPBP06028 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.58■□□□□ 0.56
GYPBP06028 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GYPBP06028 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
GYPBP06028 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GYPBP06028 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
GYPBP06028 AC007225.1-201ENST00000566331 1836 ntBASIC18.58■□□□□ 0.56
GYPBP06028 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
GYPBP06028 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
GYPBP06028 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GYPBP06028 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GYPBP06028 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
GYPBP06028 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GYPBP06028 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.57■□□□□ 0.56
GYPBP06028 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GYPBP06028 MIR572-201ENST00000384983 95 ntBASIC18.57■□□□□ 0.56
GYPBP06028 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
GYPBP06028 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.57■□□□□ 0.56
GYPBP06028 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
GYPBP06028 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
GYPBP06028 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GYPBP06028 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
GYPBP06028 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GYPBP06028 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
GYPBP06028 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GYPBP06028 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
GYPBP06028 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
GYPBP06028 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.56■□□□□ 0.56
GYPBP06028 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GYPBP06028 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
GYPBP06028 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.56■□□□□ 0.56
GYPBP06028 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.56■□□□□ 0.56
GYPBP06028 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GYPBP06028 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
GYPBP06028 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GYPBP06028 EDA-201ENST00000338901 1233 ntBASIC18.56■□□□□ 0.56
GYPBP06028 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
GYPBP06028 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.56■□□□□ 0.56
GYPBP06028 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.56■□□□□ 0.56
GYPBP06028 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
GYPBP06028 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.56■□□□□ 0.56
GYPBP06028 AC110285.6-201ENST00000617652 491 ntBASIC18.56■□□□□ 0.56
GYPBP06028 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.56■□□□□ 0.56
GYPBP06028 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GYPBP06028 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
GYPBP06028 FP700111.2-201ENST00000619190 1892 ntBASIC18.56■□□□□ 0.56
GYPBP06028 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.56■□□□□ 0.56
GYPBP06028 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
GYPBP06028 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
GYPBP06028 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
GYPBP06028 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GYPBP06028 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.55■□□□□ 0.56
GYPBP06028 MIR939-201ENST00000401314 82 ntBASIC18.55■□□□□ 0.56
GYPBP06028 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.55■□□□□ 0.56
GYPBP06028 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.55■□□□□ 0.56
GYPBP06028 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.55■□□□□ 0.56
GYPBP06028 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.55■□□□□ 0.56
GYPBP06028 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms