Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HIST1H2ABP04908 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIST1H2ABP04908 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HIST1H2ABP04908 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIST1H2ABP04908 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIST1H2ABP04908 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HIST1H2ABP04908 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
HIST1H2ABP04908 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
HIST1H2ABP04908 AP004607.4-201ENST00000530158 1459 ntBASIC18.84■□□□□ 0.61
HIST1H2ABP04908 KRT87P-202ENST00000534226 1464 ntBASIC18.84■□□□□ 0.61
HIST1H2ABP04908 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HIST1H2ABP04908 LINC02228-203ENST00000641970 1355 ntBASIC18.83■□□□□ 0.61
HIST1H2ABP04908 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HIST1H2ABP04908 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HIST1H2ABP04908 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
HIST1H2ABP04908 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
HIST1H2ABP04908 AC027612.3-201ENST00000413684 1047 ntBASIC18.83■□□□□ 0.6
HIST1H2ABP04908 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HIST1H2ABP04908 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.83■□□□□ 0.6
HIST1H2ABP04908 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HIST1H2ABP04908 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
HIST1H2ABP04908 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HIST1H2ABP04908 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
HIST1H2ABP04908 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
HIST1H2ABP04908 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HIST1H2ABP04908 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.83■□□□□ 0.6
HIST1H2ABP04908 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HIST1H2ABP04908 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.83■□□□□ 0.6
HIST1H2ABP04908 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
HIST1H2ABP04908 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.82■□□□□ 0.6
HIST1H2ABP04908 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST1H2ABP04908 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST1H2ABP04908 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
HIST1H2ABP04908 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
HIST1H2ABP04908 AC092667.1-201ENST00000434301 2586 ntBASIC18.82■□□□□ 0.6
HIST1H2ABP04908 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST1H2ABP04908 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.82■□□□□ 0.6
HIST1H2ABP04908 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST1H2ABP04908 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
HIST1H2ABP04908 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HIST1H2ABP04908 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST1H2ABP04908 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.82■□□□□ 0.6
HIST1H2ABP04908 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
HIST1H2ABP04908 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
HIST1H2ABP04908 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H2ABP04908 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
HIST1H2ABP04908 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H2ABP04908 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H2ABP04908 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H2ABP04908 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H2ABP04908 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
HIST1H2ABP04908 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H2ABP04908 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H2ABP04908 POU5F1P4-201ENST00000413175 1085 ntBASIC18.81■□□□□ 0.6
HIST1H2ABP04908 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H2ABP04908 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.81■□□□□ 0.6
HIST1H2ABP04908 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HIST1H2ABP04908 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H2ABP04908 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H2ABP04908 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
HIST1H2ABP04908 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H2ABP04908 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HIST1H2ABP04908 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H2ABP04908 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HIST1H2ABP04908 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H2ABP04908 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
HIST1H2ABP04908 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIST1H2ABP04908 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HIST1H2ABP04908 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.8■□□□□ 0.6
HIST1H2ABP04908 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
HIST1H2ABP04908 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIST1H2ABP04908 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
HIST1H2ABP04908 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.8■□□□□ 0.6
HIST1H2ABP04908 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HIST1H2ABP04908 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIST1H2ABP04908 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIST1H2ABP04908 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.8■□□□□ 0.6
HIST1H2ABP04908 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.8■□□□□ 0.6
HIST1H2ABP04908 AC120498.10-201ENST00000621827 505 ntBASIC18.8■□□□□ 0.6
HIST1H2ABP04908 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.8■□□□□ 0.6
HIST1H2ABP04908 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIST1H2ABP04908 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIST1H2ABP04908 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.8■□□□□ 0.6
HIST1H2ABP04908 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIST1H2ABP04908 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HIST1H2ABP04908 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HIST1H2ABP04908 AC121338.2-201ENST00000622535 1744 ntBASIC18.8■□□□□ 0.6
HIST1H2ABP04908 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
HIST1H2ABP04908 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
HIST1H2ABP04908 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIST1H2ABP04908 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
HIST1H2ABP04908 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.79■□□□□ 0.6
HIST1H2ABP04908 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HIST1H2ABP04908 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HIST1H2ABP04908 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.79■□□□□ 0.6
HIST1H2ABP04908 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.79■□□□□ 0.6
HIST1H2ABP04908 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
HIST1H2ABP04908 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.79■□□□□ 0.6
HIST1H2ABP04908 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.79■□□□□ 0.6
HIST1H2ABP04908 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms