Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQB1P01920 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.94■□□□□ 0.46
HLA-DQB1P01920 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
HLA-DQB1P01920 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.94■□□□□ 0.46
HLA-DQB1P01920 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQB1P01920 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.94■□□□□ 0.46
HLA-DQB1P01920 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
HLA-DQB1P01920 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.94■□□□□ 0.46
HLA-DQB1P01920 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQB1P01920 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQB1P01920 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
HLA-DQB1P01920 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQB1P01920 AC121338.2-201ENST00000622535 1744 ntBASIC17.94■□□□□ 0.46
HLA-DQB1P01920 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.94■□□□□ 0.46
HLA-DQB1P01920 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.94■□□□□ 0.46
HLA-DQB1P01920 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQB1P01920 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
HLA-DQB1P01920 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQB1P01920 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQB1P01920 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQB1P01920 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQB1P01920 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQB1P01920 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQB1P01920 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQB1P01920 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.93■□□□□ 0.46
HLA-DQB1P01920 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQB1P01920 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.93■□□□□ 0.46
HLA-DQB1P01920 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
HLA-DQB1P01920 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DQB1P01920 AC026471.1-201ENST00000564629 3026 ntBASIC17.92■□□□□ 0.46
HLA-DQB1P01920 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.92■□□□□ 0.46
HLA-DQB1P01920 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
HLA-DQB1P01920 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.92■□□□□ 0.46
HLA-DQB1P01920 AL034346.1-201ENST00000568244 1277 ntBASIC17.92■□□□□ 0.46
HLA-DQB1P01920 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DQB1P01920 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DQB1P01920 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DQB1P01920 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DQB1P01920 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DQB1P01920 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DQB1P01920 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DQB1P01920 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DQB1P01920 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DQB1P01920 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DQB1P01920 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DQB1P01920 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DQB1P01920 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.91■□□□□ 0.46
HLA-DQB1P01920 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.91■□□□□ 0.46
HLA-DQB1P01920 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DQB1P01920 AC239859.2-201ENST00000444165 318 ntBASIC17.91■□□□□ 0.46
HLA-DQB1P01920 AC241377.3-202ENST00000626088 1088 ntBASIC17.91■□□□□ 0.46
HLA-DQB1P01920 AC241585.3-202ENST00000628937 1088 ntBASIC17.91■□□□□ 0.46
HLA-DQB1P01920 AC245100.8-202ENST00000629247 1058 ntBASIC17.91■□□□□ 0.46
HLA-DQB1P01920 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
HLA-DQB1P01920 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.91■□□□□ 0.46
HLA-DQB1P01920 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DQB1P01920 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DQB1P01920 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DQB1P01920 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
HLA-DQB1P01920 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DQB1P01920 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
HLA-DQB1P01920 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.91■□□□□ 0.46
HLA-DQB1P01920 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DQB1P01920 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
HLA-DQB1P01920 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DQB1P01920 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DQB1P01920 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HLA-DQB1P01920 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.9■□□□□ 0.46
HLA-DQB1P01920 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DQB1P01920 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.9■□□□□ 0.46
HLA-DQB1P01920 AC010141.3-201ENST00000456659 717 ntBASIC17.9■□□□□ 0.46
HLA-DQB1P01920 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DQB1P01920 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
HLA-DQB1P01920 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
HLA-DQB1P01920 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DQB1P01920 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.9■□□□□ 0.46
HLA-DQB1P01920 AC125437.2-201ENST00000625180 2167 ntBASIC17.9■□□□□ 0.46
HLA-DQB1P01920 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
HLA-DQB1P01920 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
HLA-DQB1P01920 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.89■□□□□ 0.46
HLA-DQB1P01920 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DQB1P01920 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
HLA-DQB1P01920 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.89■□□□□ 0.45
HLA-DQB1P01920 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DQB1P01920 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DQB1P01920 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DQB1P01920 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DQB1P01920 AP004607.7-201ENST00000527152 1677 ntBASIC17.89■□□□□ 0.45
HLA-DQB1P01920 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
HLA-DQB1P01920 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.89■□□□□ 0.45
HLA-DQB1P01920 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.89■□□□□ 0.45
HLA-DQB1P01920 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
HLA-DQB1P01920 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DQB1P01920 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DQB1P01920 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DQB1P01920 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DQB1P01920 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.88■□□□□ 0.45
HLA-DQB1P01920 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DQB1P01920 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.88■□□□□ 0.45
HLA-DQB1P01920 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms