Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
PGK1P00558 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.2■■□□□ 1.3
PGK1P00558 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PGK1P00558 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
PGK1P00558 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.2■■□□□ 1.3
PGK1P00558 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC23.2■■□□□ 1.3
PGK1P00558 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC23.2■■□□□ 1.3
PGK1P00558 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PGK1P00558 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC23.2■■□□□ 1.3
PGK1P00558 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC23.2■■□□□ 1.3
PGK1P00558 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
PGK1P00558 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC23.2■■□□□ 1.3
PGK1P00558 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PGK1P00558 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PGK1P00558 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PGK1P00558 POM121L13P-201ENST00000422362 380 ntBASIC23.2■■□□□ 1.3
PGK1P00558 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
PGK1P00558 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.2■■□□□ 1.3
PGK1P00558 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
PGK1P00558 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PGK1P00558 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC23.19■■□□□ 1.3
PGK1P00558 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PGK1P00558 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
PGK1P00558 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC23.19■■□□□ 1.3
PGK1P00558 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
PGK1P00558 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PGK1P00558 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PGK1P00558 KLF2-202ENST00000592003 564 ntTSL 3 BASIC23.19■■□□□ 1.3
PGK1P00558 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC23.19■■□□□ 1.3
PGK1P00558 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PGK1P00558 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PGK1P00558 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PGK1P00558 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PGK1P00558 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC23.18■■□□□ 1.3
PGK1P00558 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PGK1P00558 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
PGK1P00558 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PGK1P00558 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PGK1P00558 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
PGK1P00558 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PGK1P00558 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PGK1P00558 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PGK1P00558 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
PGK1P00558 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
PGK1P00558 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
PGK1P00558 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC23.17■■□□□ 1.3
PGK1P00558 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PGK1P00558 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PGK1P00558 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PGK1P00558 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.17■■□□□ 1.3
PGK1P00558 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PGK1P00558 MDFI-202ENST00000373050 809 ntTSL 2 BASIC23.17■■□□□ 1.3
PGK1P00558 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PGK1P00558 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC23.17■■□□□ 1.3
PGK1P00558 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC23.17■■□□□ 1.3
PGK1P00558 AC105020.6-201ENST00000621523 1217 ntBASIC23.17■■□□□ 1.3
PGK1P00558 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
PGK1P00558 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PGK1P00558 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PGK1P00558 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PGK1P00558 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PGK1P00558 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PGK1P00558 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PGK1P00558 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PGK1P00558 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PGK1P00558 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
PGK1P00558 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC23.17■■□□□ 1.3
PGK1P00558 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PGK1P00558 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC23.16■■□□□ 1.3
PGK1P00558 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PGK1P00558 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PGK1P00558 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC23.16■■□□□ 1.3
PGK1P00558 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PGK1P00558 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC23.16■■□□□ 1.3
PGK1P00558 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.16■■□□□ 1.3
PGK1P00558 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PGK1P00558 STX5-203ENST00000394690 1568 ntTSL 5 BASIC23.16■■□□□ 1.3
PGK1P00558 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PGK1P00558 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PGK1P00558 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PGK1P00558 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PGK1P00558 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
PGK1P00558 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PGK1P00558 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC23.16■■□□□ 1.3
PGK1P00558 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
PGK1P00558 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
PGK1P00558 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PGK1P00558 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.15■■□□□ 1.3
PGK1P00558 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PGK1P00558 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
PGK1P00558 ISG20-202ENST00000379224 540 ntTSL 3 BASIC23.15■■□□□ 1.3
PGK1P00558 MIR1224-201ENST00000408193 85 ntBASIC23.15■■□□□ 1.3
PGK1P00558 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC23.15■■□□□ 1.3
PGK1P00558 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC23.15■■□□□ 1.3
PGK1P00558 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC23.15■■□□□ 1.3
PGK1P00558 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PGK1P00558 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.15■■□□□ 1.3
PGK1P00558 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PGK1P00558 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PGK1P00558 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms