Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MT-CO1P00395 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.24■□□□□ 0.99
MT-CO1P00395 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.24■□□□□ 0.99
MT-CO1P00395 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.24■□□□□ 0.99
MT-CO1P00395 AC083906.2-201ENST00000511578 360 ntBASIC21.24■□□□□ 0.99
MT-CO1P00395 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MT-CO1P00395 AC104771.1-201ENST00000603335 964 ntBASIC21.24■□□□□ 0.99
MT-CO1P00395 AC243732.1-201ENST00000612648 864 ntBASIC21.24■□□□□ 0.99
MT-CO1P00395 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
MT-CO1P00395 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MT-CO1P00395 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
MT-CO1P00395 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MT-CO1P00395 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MT-CO1P00395 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
MT-CO1P00395 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MT-CO1P00395 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.23■□□□□ 0.99
MT-CO1P00395 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
MT-CO1P00395 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
MT-CO1P00395 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.23■□□□□ 0.99
MT-CO1P00395 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MT-CO1P00395 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
MT-CO1P00395 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
MT-CO1P00395 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
MT-CO1P00395 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MT-CO1P00395 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MT-CO1P00395 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MT-CO1P00395 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
MT-CO1P00395 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MT-CO1P00395 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
MT-CO1P00395 GPX1P1-201ENST00000388829 606 ntBASIC21.22■□□□□ 0.99
MT-CO1P00395 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.22■□□□□ 0.99
MT-CO1P00395 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.22■□□□□ 0.99
MT-CO1P00395 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
MT-CO1P00395 AL109923.1-201ENST00000618799 583 ntBASIC21.22■□□□□ 0.99
MT-CO1P00395 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.22■□□□□ 0.99
MT-CO1P00395 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MT-CO1P00395 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.22■□□□□ 0.99
MT-CO1P00395 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
MT-CO1P00395 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MT-CO1P00395 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MT-CO1P00395 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
MT-CO1P00395 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.22■□□□□ 0.99
MT-CO1P00395 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
MT-CO1P00395 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
MT-CO1P00395 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
MT-CO1P00395 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MT-CO1P00395 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.21■□□□□ 0.99
MT-CO1P00395 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.21■□□□□ 0.99
MT-CO1P00395 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
MT-CO1P00395 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.21■□□□□ 0.99
MT-CO1P00395 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.21■□□□□ 0.99
MT-CO1P00395 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MT-CO1P00395 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.21■□□□□ 0.99
MT-CO1P00395 CYP2T1P-201ENST00000432607 1285 ntBASIC21.21■□□□□ 0.99
MT-CO1P00395 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.21■□□□□ 0.99
MT-CO1P00395 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MT-CO1P00395 AL121832.2-201ENST00000610979 668 ntBASIC21.21■□□□□ 0.99
MT-CO1P00395 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
MT-CO1P00395 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
MT-CO1P00395 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
MT-CO1P00395 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MT-CO1P00395 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
MT-CO1P00395 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
MT-CO1P00395 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.2■□□□□ 0.98
MT-CO1P00395 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
MT-CO1P00395 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MT-CO1P00395 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.2■□□□□ 0.98
MT-CO1P00395 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.2■□□□□ 0.98
MT-CO1P00395 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
MT-CO1P00395 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.2■□□□□ 0.98
MT-CO1P00395 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.2■□□□□ 0.98
MT-CO1P00395 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
MT-CO1P00395 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.19■□□□□ 0.98
MT-CO1P00395 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MT-CO1P00395 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
MT-CO1P00395 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
MT-CO1P00395 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MT-CO1P00395 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MT-CO1P00395 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
MT-CO1P00395 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MT-CO1P00395 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MT-CO1P00395 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MT-CO1P00395 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MT-CO1P00395 AC091799.1-201ENST00000422823 811 ntBASIC21.19■□□□□ 0.98
MT-CO1P00395 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
MT-CO1P00395 GUSBP6-202ENST00000438529 1198 ntBASIC21.19■□□□□ 0.98
MT-CO1P00395 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.19■□□□□ 0.98
MT-CO1P00395 AC133552.2-202ENST00000575694 574 ntBASIC21.19■□□□□ 0.98
MT-CO1P00395 AL591742.1-201ENST00000604433 565 ntBASIC21.19■□□□□ 0.98
MT-CO1P00395 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.19■□□□□ 0.98
MT-CO1P00395 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.19■□□□□ 0.98
MT-CO1P00395 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MT-CO1P00395 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MT-CO1P00395 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.19■□□□□ 0.98
MT-CO1P00395 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MT-CO1P00395 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.19■□□□□ 0.98
MT-CO1P00395 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
MT-CO1P00395 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MT-CO1P00395 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
MT-CO1P00395 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms