Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLPXO76031 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLPXO76031 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.77■□□□□ 0.6
CLPXO76031 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLPXO76031 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.77■□□□□ 0.6
CLPXO76031 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLPXO76031 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.77■□□□□ 0.6
CLPXO76031 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLPXO76031 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLPXO76031 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLPXO76031 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLPXO76031 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLPXO76031 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.77■□□□□ 0.6
CLPXO76031 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
CLPXO76031 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLPXO76031 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLPXO76031 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.77■□□□□ 0.6
CLPXO76031 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.77■□□□□ 0.6
CLPXO76031 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.77■□□□□ 0.6
CLPXO76031 AC009086.3-201ENST00000623486 1008 ntBASIC18.77■□□□□ 0.6
CLPXO76031 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLPXO76031 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
CLPXO76031 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CLPXO76031 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CLPXO76031 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLPXO76031 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLPXO76031 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLPXO76031 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLPXO76031 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLPXO76031 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLPXO76031 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.76■□□□□ 0.59
CLPXO76031 MTDHP2-201ENST00000601468 714 ntBASIC18.76■□□□□ 0.59
CLPXO76031 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.76■□□□□ 0.59
CLPXO76031 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLPXO76031 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLPXO76031 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLPXO76031 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CLPXO76031 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLPXO76031 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLPXO76031 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLPXO76031 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.75■□□□□ 0.59
CLPXO76031 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLPXO76031 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.75■□□□□ 0.59
CLPXO76031 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLPXO76031 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLPXO76031 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.75■□□□□ 0.59
CLPXO76031 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CLPXO76031 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.75■□□□□ 0.59
CLPXO76031 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.75■□□□□ 0.59
CLPXO76031 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CLPXO76031 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLPXO76031 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLPXO76031 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLPXO76031 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.75■□□□□ 0.59
CLPXO76031 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.75■□□□□ 0.59
CLPXO76031 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CLPXO76031 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.75■□□□□ 0.59
CLPXO76031 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.75■□□□□ 0.59
CLPXO76031 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.75■□□□□ 0.59
CLPXO76031 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLPXO76031 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
CLPXO76031 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLPXO76031 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLPXO76031 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CLPXO76031 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLPXO76031 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLPXO76031 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.74■□□□□ 0.59
CLPXO76031 AL162377.1-201ENST00000618844 1793 ntBASIC18.74■□□□□ 0.59
CLPXO76031 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLPXO76031 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLPXO76031 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
CLPXO76031 TSPY9P-201ENST00000440215 945 ntBASIC18.74■□□□□ 0.59
CLPXO76031 TSPY11P-201ENST00000442607 1045 ntBASIC18.74■□□□□ 0.59
CLPXO76031 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.74■□□□□ 0.59
CLPXO76031 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CLPXO76031 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.74■□□□□ 0.59
CLPXO76031 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.74■□□□□ 0.59
CLPXO76031 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLPXO76031 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLPXO76031 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLPXO76031 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CLPXO76031 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.74■□□□□ 0.59
CLPXO76031 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CLPXO76031 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLPXO76031 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLPXO76031 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLPXO76031 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLPXO76031 PLK5-205ENST00000642079 1969 ntBASIC18.73■□□□□ 0.59
CLPXO76031 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLPXO76031 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLPXO76031 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
CLPXO76031 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.73■□□□□ 0.59
CLPXO76031 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.73■□□□□ 0.59
CLPXO76031 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.73■□□□□ 0.59
CLPXO76031 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLPXO76031 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CLPXO76031 MIR6722-201ENST00000617286 78 ntBASIC18.73■□□□□ 0.59
CLPXO76031 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.73■□□□□ 0.59
CLPXO76031 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLPXO76031 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms