Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 AC142086.2-201ENST00000569753 217 ntBASIC19.91■□□□□ 0.78
SNRNP200O75643 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNRNP200O75643 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNRNP200O75643 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.91■□□□□ 0.78
SNRNP200O75643 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.91■□□□□ 0.78
SNRNP200O75643 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNRNP200O75643 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.91■□□□□ 0.78
SNRNP200O75643 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SNRNP200O75643 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SNRNP200O75643 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SNRNP200O75643 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNRNP200O75643 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNRNP200O75643 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNRNP200O75643 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.91■□□□□ 0.78
SNRNP200O75643 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
SNRNP200O75643 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNRNP200O75643 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.91■□□□□ 0.78
SNRNP200O75643 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.91■□□□□ 0.78
SNRNP200O75643 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SNRNP200O75643 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.9■□□□□ 0.78
SNRNP200O75643 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SNRNP200O75643 AL355802.2-201ENST00000402069 882 ntBASIC19.9■□□□□ 0.78
SNRNP200O75643 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.9■□□□□ 0.78
SNRNP200O75643 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
SNRNP200O75643 AL109923.1-201ENST00000618799 583 ntBASIC19.9■□□□□ 0.78
SNRNP200O75643 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SNRNP200O75643 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.9■□□□□ 0.78
SNRNP200O75643 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SNRNP200O75643 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNRNP200O75643 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SNRNP200O75643 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.9■□□□□ 0.78
SNRNP200O75643 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.9■□□□□ 0.78
SNRNP200O75643 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.9■□□□□ 0.78
SNRNP200O75643 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.9■□□□□ 0.78
SNRNP200O75643 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
SNRNP200O75643 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
SNRNP200O75643 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
SNRNP200O75643 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
SNRNP200O75643 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
SNRNP200O75643 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
SNRNP200O75643 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNRNP200O75643 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SNRNP200O75643 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SNRNP200O75643 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SNRNP200O75643 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNRNP200O75643 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNRNP200O75643 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SNRNP200O75643 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.89■□□□□ 0.77
SNRNP200O75643 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.89■□□□□ 0.77
SNRNP200O75643 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.89■□□□□ 0.77
SNRNP200O75643 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNRNP200O75643 AC087633.2-202ENST00000565166 1439 ntBASIC19.88■□□□□ 0.77
SNRNP200O75643 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
SNRNP200O75643 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.88■□□□□ 0.77
SNRNP200O75643 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNRNP200O75643 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SNRNP200O75643 AC116050.2-201ENST00000612102 1779 ntBASIC19.88■□□□□ 0.77
SNRNP200O75643 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SNRNP200O75643 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SNRNP200O75643 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
SNRNP200O75643 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.88■□□□□ 0.77
SNRNP200O75643 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.88■□□□□ 0.77
SNRNP200O75643 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.88■□□□□ 0.77
SNRNP200O75643 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.88■□□□□ 0.77
SNRNP200O75643 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNRNP200O75643 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNRNP200O75643 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNRNP200O75643 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SNRNP200O75643 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SNRNP200O75643 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.87■□□□□ 0.77
SNRNP200O75643 AC010980.2-201ENST00000587099 1412 ntBASIC19.87■□□□□ 0.77
SNRNP200O75643 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.87■□□□□ 0.77
SNRNP200O75643 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNRNP200O75643 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNRNP200O75643 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNRNP200O75643 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.87■□□□□ 0.77
SNRNP200O75643 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.87■□□□□ 0.77
SNRNP200O75643 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SNRNP200O75643 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.87■□□□□ 0.77
SNRNP200O75643 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNRNP200O75643 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.86■□□□□ 0.77
SNRNP200O75643 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.86■□□□□ 0.77
SNRNP200O75643 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SNRNP200O75643 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNRNP200O75643 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNRNP200O75643 DUSP5P2-201ENST00000426873 1033 ntBASIC19.86■□□□□ 0.77
SNRNP200O75643 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.86■□□□□ 0.77
SNRNP200O75643 AL138781.1-201ENST00000566567 1274 ntBASIC19.86■□□□□ 0.77
SNRNP200O75643 AC083880.1-201ENST00000608266 535 ntBASIC19.86■□□□□ 0.77
SNRNP200O75643 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.86■□□□□ 0.77
SNRNP200O75643 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SNRNP200O75643 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNRNP200O75643 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SNRNP200O75643 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SNRNP200O75643 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNRNP200O75643 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNRNP200O75643 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.86■□□□□ 0.77
SNRNP200O75643 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNRNP200O75643 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNRNP200O75643 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms