Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC18.61■□□□□ 0.57
PFDN1O60925 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PFDN1O60925 AC012313.1-201ENST00000593393 3059 ntBASIC18.6■□□□□ 0.57
PFDN1O60925 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.6■□□□□ 0.57
PFDN1O60925 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
PFDN1O60925 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PFDN1O60925 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PFDN1O60925 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.6■□□□□ 0.57
PFDN1O60925 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PFDN1O60925 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PFDN1O60925 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PFDN1O60925 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.6■□□□□ 0.57
PFDN1O60925 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.6■□□□□ 0.57
PFDN1O60925 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PFDN1O60925 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.59■□□□□ 0.57
PFDN1O60925 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.59■□□□□ 0.57
PFDN1O60925 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PFDN1O60925 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
PFDN1O60925 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PFDN1O60925 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.59■□□□□ 0.57
PFDN1O60925 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PFDN1O60925 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PFDN1O60925 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC18.59■□□□□ 0.57
PFDN1O60925 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC18.59■□□□□ 0.57
PFDN1O60925 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PFDN1O60925 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PFDN1O60925 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PFDN1O60925 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PFDN1O60925 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PFDN1O60925 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PFDN1O60925 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PFDN1O60925 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.59■□□□□ 0.57
PFDN1O60925 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PFDN1O60925 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.59■□□□□ 0.57
PFDN1O60925 AC018470.1-201ENST00000624790 3129 ntBASIC18.58■□□□□ 0.57
PFDN1O60925 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
PFDN1O60925 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.58■□□□□ 0.57
PFDN1O60925 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PFDN1O60925 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PFDN1O60925 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PFDN1O60925 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PFDN1O60925 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
PFDN1O60925 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.58■□□□□ 0.57
PFDN1O60925 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PFDN1O60925 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PFDN1O60925 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PFDN1O60925 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PFDN1O60925 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.58■□□□□ 0.56
PFDN1O60925 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.58■□□□□ 0.56
PFDN1O60925 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PFDN1O60925 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PFDN1O60925 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
PFDN1O60925 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.57■□□□□ 0.56
PFDN1O60925 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PFDN1O60925 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PFDN1O60925 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PFDN1O60925 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PFDN1O60925 AC005559.1-201ENST00000589661 871 ntBASIC18.57■□□□□ 0.56
PFDN1O60925 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PFDN1O60925 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.57■□□□□ 0.56
PFDN1O60925 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PFDN1O60925 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.57■□□□□ 0.56
PFDN1O60925 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
PFDN1O60925 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.57■□□□□ 0.56
PFDN1O60925 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PFDN1O60925 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.57■□□□□ 0.56
PFDN1O60925 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PFDN1O60925 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PFDN1O60925 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PFDN1O60925 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PFDN1O60925 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PFDN1O60925 HTR7P1-202ENST00000624664 4411 ntBASIC18.56■□□□□ 0.56
PFDN1O60925 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PFDN1O60925 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PFDN1O60925 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.56■□□□□ 0.56
PFDN1O60925 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.56■□□□□ 0.56
PFDN1O60925 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PFDN1O60925 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.56■□□□□ 0.56
PFDN1O60925 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PFDN1O60925 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.56■□□□□ 0.56
PFDN1O60925 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PFDN1O60925 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PFDN1O60925 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PFDN1O60925 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PFDN1O60925 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PFDN1O60925 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PFDN1O60925 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PFDN1O60925 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PFDN1O60925 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
PFDN1O60925 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PFDN1O60925 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PFDN1O60925 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PFDN1O60925 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PFDN1O60925 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PFDN1O60925 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PFDN1O60925 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PFDN1O60925 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PFDN1O60925 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PFDN1O60925 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.55■□□□□ 0.56
PFDN1O60925 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms