Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GFRA3O60609 ATP5G1P1-201ENST00000448724 379 ntBASIC20.42■□□□□ 0.86
GFRA3O60609 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.42■□□□□ 0.86
GFRA3O60609 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.42■□□□□ 0.86
GFRA3O60609 LINC01238-205ENST00000567549 1107 ntBASIC20.42■□□□□ 0.86
GFRA3O60609 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
GFRA3O60609 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.42■□□□□ 0.86
GFRA3O60609 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.42■□□□□ 0.86
GFRA3O60609 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GFRA3O60609 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.42■□□□□ 0.86
GFRA3O60609 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GFRA3O60609 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
GFRA3O60609 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GFRA3O60609 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
GFRA3O60609 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
GFRA3O60609 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GFRA3O60609 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
GFRA3O60609 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.41■□□□□ 0.86
GFRA3O60609 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.41■□□□□ 0.86
GFRA3O60609 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GFRA3O60609 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.41■□□□□ 0.86
GFRA3O60609 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GFRA3O60609 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.41■□□□□ 0.86
GFRA3O60609 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.41■□□□□ 0.86
GFRA3O60609 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
GFRA3O60609 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GFRA3O60609 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GFRA3O60609 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GFRA3O60609 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GFRA3O60609 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GFRA3O60609 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GFRA3O60609 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.4■□□□□ 0.86
GFRA3O60609 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GFRA3O60609 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GFRA3O60609 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.4■□□□□ 0.86
GFRA3O60609 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.4■□□□□ 0.86
GFRA3O60609 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.4■□□□□ 0.86
GFRA3O60609 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.4■□□□□ 0.86
GFRA3O60609 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.4■□□□□ 0.86
GFRA3O60609 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.4■□□□□ 0.86
GFRA3O60609 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.4■□□□□ 0.86
GFRA3O60609 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.4■□□□□ 0.86
GFRA3O60609 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GFRA3O60609 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.4■□□□□ 0.86
GFRA3O60609 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.4■□□□□ 0.86
GFRA3O60609 AC010947.1-201ENST00000623454 693 ntBASIC20.4■□□□□ 0.86
GFRA3O60609 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
GFRA3O60609 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
GFRA3O60609 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
GFRA3O60609 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
GFRA3O60609 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.39■□□□□ 0.86
GFRA3O60609 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
GFRA3O60609 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GFRA3O60609 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.39■□□□□ 0.85
GFRA3O60609 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
GFRA3O60609 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
GFRA3O60609 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GFRA3O60609 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
GFRA3O60609 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.39■□□□□ 0.85
GFRA3O60609 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.39■□□□□ 0.85
GFRA3O60609 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
GFRA3O60609 AC010203.1-204ENST00000548782 407 ntBASIC20.39■□□□□ 0.85
GFRA3O60609 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GFRA3O60609 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.39■□□□□ 0.85
GFRA3O60609 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GFRA3O60609 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GFRA3O60609 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.38■□□□□ 0.85
GFRA3O60609 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
GFRA3O60609 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
GFRA3O60609 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GFRA3O60609 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.38■□□□□ 0.85
GFRA3O60609 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GFRA3O60609 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GFRA3O60609 NUDT16P1-203ENST00000513809 620 ntBASIC20.38■□□□□ 0.85
GFRA3O60609 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GFRA3O60609 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.38■□□□□ 0.85
GFRA3O60609 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.38■□□□□ 0.85
GFRA3O60609 REXO1L10P-201ENST00000615707 1290 ntBASIC20.38■□□□□ 0.85
GFRA3O60609 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
GFRA3O60609 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
GFRA3O60609 DUSP8P4-201ENST00000399538 1761 ntBASIC20.38■□□□□ 0.85
GFRA3O60609 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GFRA3O60609 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.37■□□□□ 0.85
GFRA3O60609 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GFRA3O60609 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GFRA3O60609 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GFRA3O60609 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GFRA3O60609 AL390955.1-201ENST00000428694 934 ntBASIC20.37■□□□□ 0.85
GFRA3O60609 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.37■□□□□ 0.85
GFRA3O60609 AC022616.7-201ENST00000525383 220 ntBASIC20.37■□□□□ 0.85
GFRA3O60609 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.37■□□□□ 0.85
GFRA3O60609 AL691432.3-201ENST00000621860 400 ntBASIC20.37■□□□□ 0.85
GFRA3O60609 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.37■□□□□ 0.85
GFRA3O60609 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GFRA3O60609 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GFRA3O60609 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GFRA3O60609 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.36■□□□□ 0.85
GFRA3O60609 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
GFRA3O60609 AC027702.1-201ENST00000563810 1770 ntBASIC20.36■□□□□ 0.85
GFRA3O60609 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms