Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLOCKO15516 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLOCKO15516 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
CLOCKO15516 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CLOCKO15516 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLOCKO15516 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLOCKO15516 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.61■□□□□ 0.73
CLOCKO15516 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.61■□□□□ 0.73
CLOCKO15516 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLOCKO15516 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLOCKO15516 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLOCKO15516 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLOCKO15516 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.61■□□□□ 0.73
CLOCKO15516 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.61■□□□□ 0.73
CLOCKO15516 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLOCKO15516 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.61■□□□□ 0.73
CLOCKO15516 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.61■□□□□ 0.73
CLOCKO15516 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.61■□□□□ 0.73
CLOCKO15516 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLOCKO15516 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLOCKO15516 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLOCKO15516 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.61■□□□□ 0.73
CLOCKO15516 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLOCKO15516 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLOCKO15516 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.61■□□□□ 0.73
CLOCKO15516 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CLOCKO15516 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CLOCKO15516 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.61■□□□□ 0.73
CLOCKO15516 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLOCKO15516 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLOCKO15516 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CLOCKO15516 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CLOCKO15516 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.6■□□□□ 0.73
CLOCKO15516 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CLOCKO15516 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLOCKO15516 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLOCKO15516 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.6■□□□□ 0.73
CLOCKO15516 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.6■□□□□ 0.73
CLOCKO15516 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.6■□□□□ 0.73
CLOCKO15516 SERBP1P1-201ENST00000396021 1160 ntBASIC19.6■□□□□ 0.73
CLOCKO15516 ZNRF2P3-201ENST00000424200 374 ntBASIC19.6■□□□□ 0.73
CLOCKO15516 AF213884.3-201ENST00000563833 479 ntBASIC19.6■□□□□ 0.73
CLOCKO15516 AL034346.1-201ENST00000568244 1277 ntBASIC19.6■□□□□ 0.73
CLOCKO15516 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CLOCKO15516 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.6■□□□□ 0.73
CLOCKO15516 AL031432.3-201ENST00000607698 485 ntBASIC19.6■□□□□ 0.73
CLOCKO15516 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLOCKO15516 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.6■□□□□ 0.73
CLOCKO15516 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CLOCKO15516 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.6■□□□□ 0.73
CLOCKO15516 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLOCKO15516 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CLOCKO15516 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.6■□□□□ 0.73
CLOCKO15516 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.6■□□□□ 0.73
CLOCKO15516 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLOCKO15516 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.6■□□□□ 0.73
CLOCKO15516 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLOCKO15516 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLOCKO15516 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLOCKO15516 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CLOCKO15516 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLOCKO15516 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLOCKO15516 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLOCKO15516 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.59■□□□□ 0.73
CLOCKO15516 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.59■□□□□ 0.73
CLOCKO15516 SUDS3P1-201ENST00000505831 966 ntBASIC19.59■□□□□ 0.73
CLOCKO15516 MIR4767-201ENST00000582827 78 ntBASIC19.59■□□□□ 0.73
CLOCKO15516 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLOCKO15516 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLOCKO15516 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLOCKO15516 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLOCKO15516 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLOCKO15516 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLOCKO15516 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLOCKO15516 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLOCKO15516 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLOCKO15516 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CLOCKO15516 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLOCKO15516 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLOCKO15516 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLOCKO15516 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLOCKO15516 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CLOCKO15516 AC087239.1-201ENST00000622671 572 ntBASIC19.58■□□□□ 0.72
CLOCKO15516 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLOCKO15516 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLOCKO15516 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CLOCKO15516 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.58■□□□□ 0.72
CLOCKO15516 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLOCKO15516 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLOCKO15516 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.57■□□□□ 0.72
CLOCKO15516 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLOCKO15516 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLOCKO15516 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.57■□□□□ 0.72
CLOCKO15516 AC087289.5-201ENST00000586076 3175 ntBASIC19.57■□□□□ 0.72
CLOCKO15516 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLOCKO15516 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLOCKO15516 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLOCKO15516 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLOCKO15516 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLOCKO15516 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms