Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
FOXN1O15353 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC24.87■■□□□ 1.57
FOXN1O15353 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC24.87■■□□□ 1.57
FOXN1O15353 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC24.87■■□□□ 1.57
FOXN1O15353 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC24.87■■□□□ 1.57
FOXN1O15353 RMI2-205ENST00000576027 818 ntTSL 2 BASIC24.87■■□□□ 1.57
FOXN1O15353 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC24.87■■□□□ 1.57
FOXN1O15353 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
FOXN1O15353 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
FOXN1O15353 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
FOXN1O15353 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
FOXN1O15353 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
FOXN1O15353 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC24.86■■□□□ 1.57
FOXN1O15353 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
FOXN1O15353 AC139530.1-201ENST00000575312 1977 ntBASIC24.86■■□□□ 1.57
FOXN1O15353 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC24.86■■□□□ 1.57
FOXN1O15353 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC24.86■■□□□ 1.57
FOXN1O15353 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
FOXN1O15353 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC24.86■■□□□ 1.57
FOXN1O15353 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC24.86■■□□□ 1.57
FOXN1O15353 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
FOXN1O15353 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
FOXN1O15353 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC24.85■■□□□ 1.57
FOXN1O15353 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
FOXN1O15353 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
FOXN1O15353 AC242852.2-201ENST00000615738 1807 ntBASIC24.85■■□□□ 1.57
FOXN1O15353 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC24.85■■□□□ 1.57
FOXN1O15353 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
FOXN1O15353 RPS2P55-201ENST00000397318 883 ntBASIC24.85■■□□□ 1.57
FOXN1O15353 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
FOXN1O15353 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
FOXN1O15353 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC24.85■■□□□ 1.57
FOXN1O15353 AC107956.1-201ENST00000494359 873 ntBASIC24.85■■□□□ 1.57
FOXN1O15353 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC24.85■■□□□ 1.57
FOXN1O15353 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC24.85■■□□□ 1.57
FOXN1O15353 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
FOXN1O15353 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
FOXN1O15353 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC24.84■■□□□ 1.57
FOXN1O15353 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
FOXN1O15353 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
FOXN1O15353 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC24.84■■□□□ 1.57
FOXN1O15353 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC24.84■■□□□ 1.57
FOXN1O15353 AC060766.5-201ENST00000590539 871 ntBASIC24.84■■□□□ 1.57
FOXN1O15353 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC24.84■■□□□ 1.57
FOXN1O15353 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC24.84■■□□□ 1.57
FOXN1O15353 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
FOXN1O15353 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
FOXN1O15353 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
FOXN1O15353 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC24.84■■□□□ 1.57
FOXN1O15353 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
FOXN1O15353 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
FOXN1O15353 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
FOXN1O15353 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
FOXN1O15353 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC24.83■■□□□ 1.57
FOXN1O15353 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
FOXN1O15353 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
FOXN1O15353 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
FOXN1O15353 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
FOXN1O15353 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC24.83■■□□□ 1.57
FOXN1O15353 NAA20-201ENST00000310450 920 ntTSL 2 BASIC24.83■■□□□ 1.57
FOXN1O15353 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
FOXN1O15353 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
FOXN1O15353 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC24.83■■□□□ 1.57
FOXN1O15353 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC24.83■■□□□ 1.57
FOXN1O15353 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC24.83■■□□□ 1.57
FOXN1O15353 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
FOXN1O15353 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC24.83■■□□□ 1.57
FOXN1O15353 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC24.83■■□□□ 1.57
FOXN1O15353 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
FOXN1O15353 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
FOXN1O15353 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
FOXN1O15353 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
FOXN1O15353 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
FOXN1O15353 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
FOXN1O15353 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
FOXN1O15353 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC24.82■■□□□ 1.56
FOXN1O15353 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
FOXN1O15353 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC24.82■■□□□ 1.56
FOXN1O15353 AC055733.4-201ENST00000638462 1354 ntBASIC24.82■■□□□ 1.56
FOXN1O15353 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
FOXN1O15353 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
FOXN1O15353 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
FOXN1O15353 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
FOXN1O15353 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
FOXN1O15353 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC24.82■■□□□ 1.56
FOXN1O15353 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC24.82■■□□□ 1.56
FOXN1O15353 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
FOXN1O15353 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
FOXN1O15353 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC24.82■■□□□ 1.56
FOXN1O15353 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC24.82■■□□□ 1.56
FOXN1O15353 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
FOXN1O15353 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC24.82■■□□□ 1.56
FOXN1O15353 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC24.82■■□□□ 1.56
FOXN1O15353 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
FOXN1O15353 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC24.81■■□□□ 1.56
FOXN1O15353 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
FOXN1O15353 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
FOXN1O15353 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
FOXN1O15353 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
FOXN1O15353 DHDH-203ENST00000522614 776 ntTSL 5 BASIC24.81■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms