Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TNFSF11O14788 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFSF11O14788 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFSF11O14788 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TNFSF11O14788 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.65■□□□□ 0.58
TNFSF11O14788 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TNFSF11O14788 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNFSF11O14788 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.64■□□□□ 0.58
TNFSF11O14788 FEM1AP4-201ENST00000443167 1987 ntBASIC18.64■□□□□ 0.58
TNFSF11O14788 AF106564.1-201ENST00000607058 2553 ntBASIC18.64■□□□□ 0.57
TNFSF11O14788 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNFSF11O14788 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNFSF11O14788 AC091799.1-201ENST00000422823 811 ntBASIC18.64■□□□□ 0.57
TNFSF11O14788 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TNFSF11O14788 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.64■□□□□ 0.57
TNFSF11O14788 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNFSF11O14788 AC068338.2-201ENST00000563278 1430 ntBASIC18.64■□□□□ 0.57
TNFSF11O14788 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNFSF11O14788 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TNFSF11O14788 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNFSF11O14788 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNFSF11O14788 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.64■□□□□ 0.57
TNFSF11O14788 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFSF11O14788 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.63■□□□□ 0.57
TNFSF11O14788 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFSF11O14788 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TNFSF11O14788 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFSF11O14788 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TNFSF11O14788 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFSF11O14788 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.63■□□□□ 0.57
TNFSF11O14788 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.63■□□□□ 0.57
TNFSF11O14788 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.63■□□□□ 0.57
TNFSF11O14788 AL591742.1-201ENST00000604433 565 ntBASIC18.63■□□□□ 0.57
TNFSF11O14788 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.63■□□□□ 0.57
TNFSF11O14788 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.63■□□□□ 0.57
TNFSF11O14788 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFSF11O14788 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.63■□□□□ 0.57
TNFSF11O14788 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.63■□□□□ 0.57
TNFSF11O14788 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
TNFSF11O14788 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFSF11O14788 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFSF11O14788 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFSF11O14788 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFSF11O14788 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TNFSF11O14788 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFSF11O14788 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.62■□□□□ 0.57
TNFSF11O14788 CYP2T1P-201ENST00000432607 1285 ntBASIC18.62■□□□□ 0.57
TNFSF11O14788 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.62■□□□□ 0.57
TNFSF11O14788 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.62■□□□□ 0.57
TNFSF11O14788 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.62■□□□□ 0.57
TNFSF11O14788 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TNFSF11O14788 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TNFSF11O14788 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.62■□□□□ 0.57
TNFSF11O14788 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFSF11O14788 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TNFSF11O14788 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.61■□□□□ 0.57
TNFSF11O14788 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TNFSF11O14788 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.61■□□□□ 0.57
TNFSF11O14788 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TNFSF11O14788 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.61■□□□□ 0.57
TNFSF11O14788 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TNFSF11O14788 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
TNFSF11O14788 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TNFSF11O14788 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.61■□□□□ 0.57
TNFSF11O14788 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.61■□□□□ 0.57
TNFSF11O14788 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
TNFSF11O14788 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.61■□□□□ 0.57
TNFSF11O14788 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.61■□□□□ 0.57
TNFSF11O14788 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TNFSF11O14788 AL050303.2-201ENST00000619798 666 ntBASIC18.61■□□□□ 0.57
TNFSF11O14788 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNFSF11O14788 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNFSF11O14788 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TNFSF11O14788 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TNFSF11O14788 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNFSF11O14788 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNFSF11O14788 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNFSF11O14788 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.6■□□□□ 0.57
TNFSF11O14788 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
TNFSF11O14788 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.6■□□□□ 0.57
TNFSF11O14788 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNFSF11O14788 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.6■□□□□ 0.57
TNFSF11O14788 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TNFSF11O14788 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.6■□□□□ 0.57
TNFSF11O14788 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNFSF11O14788 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
TNFSF11O14788 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TNFSF11O14788 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.6■□□□□ 0.57
TNFSF11O14788 AL049796.1-201ENST00000565336 1766 ntBASIC18.6■□□□□ 0.57
TNFSF11O14788 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNFSF11O14788 AC007375.3-201ENST00000600936 2314 ntBASIC18.6■□□□□ 0.57
TNFSF11O14788 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TNFSF11O14788 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TNFSF11O14788 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFSF11O14788 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFSF11O14788 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFSF11O14788 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TNFSF11O14788 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TNFSF11O14788 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFSF11O14788 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms