Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDLIM1O00151 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDLIM1O00151 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDLIM1O00151 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDLIM1O00151 AC006128.1-201ENST00000624704 1661 ntBASIC19.66■□□□□ 0.74
PDLIM1O00151 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDLIM1O00151 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.66■□□□□ 0.74
PDLIM1O00151 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PDLIM1O00151 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PDLIM1O00151 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.66■□□□□ 0.74
PDLIM1O00151 AC106739.1-201ENST00000617035 715 ntBASIC19.66■□□□□ 0.74
PDLIM1O00151 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDLIM1O00151 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDLIM1O00151 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
PDLIM1O00151 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
PDLIM1O00151 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDLIM1O00151 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
PDLIM1O00151 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDLIM1O00151 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PDLIM1O00151 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.66■□□□□ 0.74
PDLIM1O00151 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.65■□□□□ 0.74
PDLIM1O00151 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.65■□□□□ 0.74
PDLIM1O00151 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDLIM1O00151 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDLIM1O00151 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.65■□□□□ 0.74
PDLIM1O00151 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.65■□□□□ 0.74
PDLIM1O00151 AC133561.4-201ENST00000566112 224 ntBASIC19.65■□□□□ 0.74
PDLIM1O00151 AL136162.1-201ENST00000607711 1078 ntBASIC19.65■□□□□ 0.74
PDLIM1O00151 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.65■□□□□ 0.74
PDLIM1O00151 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDLIM1O00151 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDLIM1O00151 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDLIM1O00151 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDLIM1O00151 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDLIM1O00151 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PDLIM1O00151 PLK5-205ENST00000642079 1969 ntBASIC19.64■□□□□ 0.74
PDLIM1O00151 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PDLIM1O00151 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
PDLIM1O00151 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
PDLIM1O00151 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PDLIM1O00151 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PDLIM1O00151 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PDLIM1O00151 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDLIM1O00151 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
PDLIM1O00151 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PDLIM1O00151 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDLIM1O00151 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDLIM1O00151 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
PDLIM1O00151 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDLIM1O00151 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDLIM1O00151 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.64■□□□□ 0.73
PDLIM1O00151 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDLIM1O00151 AC024257.2-201ENST00000549699 147 ntBASIC19.64■□□□□ 0.73
PDLIM1O00151 MIR3181-201ENST00000578512 73 ntBASIC19.64■□□□□ 0.73
PDLIM1O00151 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.64■□□□□ 0.73
PDLIM1O00151 AL499627.2-201ENST00000606283 725 ntBASIC19.64■□□□□ 0.73
PDLIM1O00151 AC011298.3-201ENST00000615796 283 ntBASIC19.64■□□□□ 0.73
PDLIM1O00151 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.64■□□□□ 0.73
PDLIM1O00151 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDLIM1O00151 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
PDLIM1O00151 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDLIM1O00151 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDLIM1O00151 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDLIM1O00151 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
PDLIM1O00151 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDLIM1O00151 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDLIM1O00151 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDLIM1O00151 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.63■□□□□ 0.73
PDLIM1O00151 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDLIM1O00151 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PDLIM1O00151 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.63■□□□□ 0.73
PDLIM1O00151 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDLIM1O00151 AC135279.3-201ENST00000610945 1311 ntBASIC19.63■□□□□ 0.73
PDLIM1O00151 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PDLIM1O00151 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.63■□□□□ 0.73
PDLIM1O00151 MIR638-201ENST00000385237 100 ntBASIC19.63■□□□□ 0.73
PDLIM1O00151 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PDLIM1O00151 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDLIM1O00151 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDLIM1O00151 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PDLIM1O00151 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDLIM1O00151 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDLIM1O00151 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.62■□□□□ 0.73
PDLIM1O00151 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDLIM1O00151 AC112907.3-201ENST00000577781 2400 ntBASIC19.62■□□□□ 0.73
PDLIM1O00151 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDLIM1O00151 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.62■□□□□ 0.73
PDLIM1O00151 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDLIM1O00151 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDLIM1O00151 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDLIM1O00151 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDLIM1O00151 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.62■□□□□ 0.73
PDLIM1O00151 PBX2P1-201ENST00000493219 1291 ntBASIC19.62■□□□□ 0.73
PDLIM1O00151 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.62■□□□□ 0.73
PDLIM1O00151 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.62■□□□□ 0.73
PDLIM1O00151 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDLIM1O00151 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.62■□□□□ 0.73
PDLIM1O00151 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDLIM1O00151 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDLIM1O00151 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms