Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.82■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.82■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.82■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.82■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.81■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.81■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 AL355472.2-201ENST00000422958 438 ntBASIC20.81■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 RNA5SP413-201ENST00000516373 109 ntBASIC20.81■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.81■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 AL589743.5-201ENST00000616611 1050 ntBASIC20.81■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.81■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 MYC-209ENST00000641252 345 ntBASIC20.81■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.8■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.8■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.8■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.8■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 TSPY20P-201ENST00000450910 630 ntBASIC20.8■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.8■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.8■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.8■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.8■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.79■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.79■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.79■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.79■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.79■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.79■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.79■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.79■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 AC083880.1-201ENST00000608266 535 ntBASIC20.79■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.79■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 KRT17P1-201ENST00000399211 1546 ntBASIC20.78■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.78■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 AC244015.2-201ENST00000616358 1861 ntBASIC20.78■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.78■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.78■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.78■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 FAM201B-201ENST00000458407 597 ntBASIC20.78■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.78■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.78■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.78■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.77■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.77■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms