Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINC01548A6NM66 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
LINC01548A6NM66 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINC01548A6NM66 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINC01548A6NM66 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINC01548A6NM66 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINC01548A6NM66 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.39■□□□□ 0.21
LINC01548A6NM66 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.39■□□□□ 0.21
LINC01548A6NM66 AC006970.2-201ENST00000450065 779 ntBASIC16.39■□□□□ 0.21
LINC01548A6NM66 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
LINC01548A6NM66 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.39■□□□□ 0.21
LINC01548A6NM66 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.39■□□□□ 0.21
LINC01548A6NM66 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.39■□□□□ 0.21
LINC01548A6NM66 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
LINC01548A6NM66 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.39■□□□□ 0.21
LINC01548A6NM66 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.39■□□□□ 0.21
LINC01548A6NM66 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
LINC01548A6NM66 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
LINC01548A6NM66 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINC01548A6NM66 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LINC01548A6NM66 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINC01548A6NM66 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.38■□□□□ 0.21
LINC01548A6NM66 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LINC01548A6NM66 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LINC01548A6NM66 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LINC01548A6NM66 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LINC01548A6NM66 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LINC01548A6NM66 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LINC01548A6NM66 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LINC01548A6NM66 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LINC01548A6NM66 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LINC01548A6NM66 AC016405.3-201ENST00000607710 860 ntBASIC16.38■□□□□ 0.21
LINC01548A6NM66 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LINC01548A6NM66 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LINC01548A6NM66 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LINC01548A6NM66 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
LINC01548A6NM66 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LINC01548A6NM66 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LINC01548A6NM66 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LINC01548A6NM66 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LINC01548A6NM66 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
LINC01548A6NM66 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
LINC01548A6NM66 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LINC01548A6NM66 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.37■□□□□ 0.21
LINC01548A6NM66 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LINC01548A6NM66 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC16.37■□□□□ 0.21
LINC01548A6NM66 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.37■□□□□ 0.21
LINC01548A6NM66 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LINC01548A6NM66 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.37■□□□□ 0.21
LINC01548A6NM66 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.37■□□□□ 0.21
LINC01548A6NM66 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.37■□□□□ 0.21
LINC01548A6NM66 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.37■□□□□ 0.21
LINC01548A6NM66 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LINC01548A6NM66 AC007322.4-201ENST00000509611 723 ntBASIC16.37■□□□□ 0.21
LINC01548A6NM66 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.37■□□□□ 0.21
LINC01548A6NM66 AL591742.1-201ENST00000604433 565 ntBASIC16.37■□□□□ 0.21
LINC01548A6NM66 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.37■□□□□ 0.21
LINC01548A6NM66 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LINC01548A6NM66 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.37■□□□□ 0.21
LINC01548A6NM66 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.37■□□□□ 0.21
LINC01548A6NM66 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LINC01548A6NM66 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
LINC01548A6NM66 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.37■□□□□ 0.21
LINC01548A6NM66 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LINC01548A6NM66 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC16.37■□□□□ 0.21
LINC01548A6NM66 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC16.37■□□□□ 0.21
LINC01548A6NM66 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.37■□□□□ 0.21
LINC01548A6NM66 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
LINC01548A6NM66 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC16.36■□□□□ 0.21
LINC01548A6NM66 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.36■□□□□ 0.21
LINC01548A6NM66 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINC01548A6NM66 AL049796.1-201ENST00000565336 1766 ntBASIC16.36■□□□□ 0.21
LINC01548A6NM66 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINC01548A6NM66 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
LINC01548A6NM66 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
LINC01548A6NM66 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.36■□□□□ 0.21
LINC01548A6NM66 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINC01548A6NM66 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
LINC01548A6NM66 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LINC01548A6NM66 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.36■□□□□ 0.21
LINC01548A6NM66 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
LINC01548A6NM66 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINC01548A6NM66 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LINC01548A6NM66 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINC01548A6NM66 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.36■□□□□ 0.21
LINC01548A6NM66 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.35■□□□□ 0.21
LINC01548A6NM66 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC01548A6NM66 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC16.35■□□□□ 0.21
LINC01548A6NM66 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.35■□□□□ 0.21
LINC01548A6NM66 CYP2T1P-201ENST00000432607 1285 ntBASIC16.35■□□□□ 0.21
LINC01548A6NM66 NCF1B-203ENST00000435988 1254 ntBASIC16.35■□□□□ 0.21
LINC01548A6NM66 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.35■□□□□ 0.21
LINC01548A6NM66 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.35■□□□□ 0.21
LINC01548A6NM66 AC083906.2-201ENST00000511578 360 ntBASIC16.35■□□□□ 0.21
LINC01548A6NM66 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.35■□□□□ 0.21
LINC01548A6NM66 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.35■□□□□ 0.21
LINC01548A6NM66 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.35■□□□□ 0.21
LINC01548A6NM66 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC01548A6NM66 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.35■□□□□ 0.21
LINC01548A6NM66 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms