Protein–RNA interactions for Protein: A6NLE4

SMIM23, Small integral membrane protein 23, humanhuman

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM23A6NLE4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMIM23A6NLE4 AP006587.3-201ENST00000525742 1516 ntBASIC21.19■□□□□ 0.98
SMIM23A6NLE4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
SMIM23A6NLE4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMIM23A6NLE4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMIM23A6NLE4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMIM23A6NLE4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SMIM23A6NLE4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.18■□□□□ 0.98
SMIM23A6NLE4 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.18■□□□□ 0.98
SMIM23A6NLE4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMIM23A6NLE4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SMIM23A6NLE4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
SMIM23A6NLE4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMIM23A6NLE4 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMIM23A6NLE4 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMIM23A6NLE4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.18■□□□□ 0.98
SMIM23A6NLE4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMIM23A6NLE4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SMIM23A6NLE4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.18■□□□□ 0.98
SMIM23A6NLE4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SMIM23A6NLE4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SMIM23A6NLE4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SMIM23A6NLE4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMIM23A6NLE4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMIM23A6NLE4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.17■□□□□ 0.98
SMIM23A6NLE4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMIM23A6NLE4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
SMIM23A6NLE4 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.17■□□□□ 0.98
SMIM23A6NLE4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SMIM23A6NLE4 AC007225.1-201ENST00000566331 1836 ntBASIC21.17■□□□□ 0.98
SMIM23A6NLE4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
SMIM23A6NLE4 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SMIM23A6NLE4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.17■□□□□ 0.98
SMIM23A6NLE4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMIM23A6NLE4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.17■□□□□ 0.98
SMIM23A6NLE4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMIM23A6NLE4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMIM23A6NLE4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
SMIM23A6NLE4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SMIM23A6NLE4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMIM23A6NLE4 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMIM23A6NLE4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SMIM23A6NLE4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMIM23A6NLE4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SMIM23A6NLE4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMIM23A6NLE4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SMIM23A6NLE4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SMIM23A6NLE4 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.16■□□□□ 0.98
SMIM23A6NLE4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMIM23A6NLE4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMIM23A6NLE4 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.16■□□□□ 0.98
SMIM23A6NLE4 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.15■□□□□ 0.98
SMIM23A6NLE4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.15■□□□□ 0.98
SMIM23A6NLE4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMIM23A6NLE4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMIM23A6NLE4 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMIM23A6NLE4 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMIM23A6NLE4 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SMIM23A6NLE4 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SMIM23A6NLE4 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMIM23A6NLE4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.15■□□□□ 0.98
SMIM23A6NLE4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.15■□□□□ 0.98
SMIM23A6NLE4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMIM23A6NLE4 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMIM23A6NLE4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SMIM23A6NLE4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.15■□□□□ 0.98
SMIM23A6NLE4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMIM23A6NLE4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMIM23A6NLE4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.15■□□□□ 0.98
SMIM23A6NLE4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.15■□□□□ 0.98
SMIM23A6NLE4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.14■□□□□ 0.98
SMIM23A6NLE4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SMIM23A6NLE4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SMIM23A6NLE4 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.14■□□□□ 0.98
SMIM23A6NLE4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
SMIM23A6NLE4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SMIM23A6NLE4 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
SMIM23A6NLE4 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
SMIM23A6NLE4 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
SMIM23A6NLE4 AC009299.2-201ENST00000482477 511 ntBASIC21.14■□□□□ 0.97
SMIM23A6NLE4 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SMIM23A6NLE4 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMIM23A6NLE4 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMIM23A6NLE4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMIM23A6NLE4 AL512408.1-201ENST00000569378 2000 ntBASIC21.14■□□□□ 0.97
SMIM23A6NLE4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMIM23A6NLE4 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.13■□□□□ 0.97
SMIM23A6NLE4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.13■□□□□ 0.97
SMIM23A6NLE4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.13■□□□□ 0.97
SMIM23A6NLE4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMIM23A6NLE4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SMIM23A6NLE4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMIM23A6NLE4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SMIM23A6NLE4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SMIM23A6NLE4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SMIM23A6NLE4 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SMIM23A6NLE4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.13■□□□□ 0.97
SMIM23A6NLE4 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SMIM23A6NLE4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.12■□□□□ 0.97
SMIM23A6NLE4 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms