Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01546A6NGU7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01546A6NGU7 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01546A6NGU7 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01546A6NGU7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC14.69□□□□□ -0.06
LINC01546A6NGU7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01546A6NGU7 LBX2-AS1-202ENST00000603175 2083 ntBASIC14.69□□□□□ -0.06
LINC01546A6NGU7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
LINC01546A6NGU7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC14.68□□□□□ -0.06
LINC01546A6NGU7 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC14.68□□□□□ -0.06
LINC01546A6NGU7 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01546A6NGU7 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01546A6NGU7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC14.68□□□□□ -0.06
LINC01546A6NGU7 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01546A6NGU7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01546A6NGU7 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
LINC01546A6NGU7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
LINC01546A6NGU7 AC011484.1-201ENST00000377652 1995 ntBASIC14.68□□□□□ -0.06
LINC01546A6NGU7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01546A6NGU7 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC14.68□□□□□ -0.06
LINC01546A6NGU7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
LINC01546A6NGU7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC14.68□□□□□ -0.06
LINC01546A6NGU7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC14.68□□□□□ -0.06
LINC01546A6NGU7 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC14.68□□□□□ -0.06
LINC01546A6NGU7 BHLHE23-202ENST00000612929 1109 ntBASIC14.68□□□□□ -0.06
LINC01546A6NGU7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01546A6NGU7 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
LINC01546A6NGU7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01546A6NGU7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01546A6NGU7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01546A6NGU7 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
LINC01546A6NGU7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01546A6NGU7 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
LINC01546A6NGU7 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC14.68□□□□□ -0.06
LINC01546A6NGU7 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC01546A6NGU7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC14.67□□□□□ -0.06
LINC01546A6NGU7 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
LINC01546A6NGU7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC14.67□□□□□ -0.06
LINC01546A6NGU7 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC14.67□□□□□ -0.06
LINC01546A6NGU7 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01546A6NGU7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01546A6NGU7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01546A6NGU7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC14.67□□□□□ -0.06
LINC01546A6NGU7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LINC01546A6NGU7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC14.67□□□□□ -0.06
LINC01546A6NGU7 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LINC01546A6NGU7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01546A6NGU7 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01546A6NGU7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC14.67□□□□□ -0.06
LINC01546A6NGU7 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
LINC01546A6NGU7 AC021242.3-201ENST00000607598 1377 ntBASIC14.67□□□□□ -0.06
LINC01546A6NGU7 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01546A6NGU7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC01546A6NGU7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC14.67□□□□□ -0.06
LINC01546A6NGU7 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LINC01546A6NGU7 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC14.67□□□□□ -0.06
LINC01546A6NGU7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
LINC01546A6NGU7 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC14.67□□□□□ -0.06
LINC01546A6NGU7 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01546A6NGU7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01546A6NGU7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01546A6NGU7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01546A6NGU7 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
LINC01546A6NGU7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01546A6NGU7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01546A6NGU7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01546A6NGU7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01546A6NGU7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01546A6NGU7 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01546A6NGU7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01546A6NGU7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
LINC01546A6NGU7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01546A6NGU7 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
LINC01546A6NGU7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01546A6NGU7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
LINC01546A6NGU7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01546A6NGU7 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC14.66□□□□□ -0.06
LINC01546A6NGU7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
LINC01546A6NGU7 OR2I1P-207ENST00000453522 948 ntBASIC14.66□□□□□ -0.06
LINC01546A6NGU7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC14.66□□□□□ -0.06
LINC01546A6NGU7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01546A6NGU7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
LINC01546A6NGU7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC14.66□□□□□ -0.06
LINC01546A6NGU7 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC14.66□□□□□ -0.06
LINC01546A6NGU7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC14.66□□□□□ -0.06
LINC01546A6NGU7 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC01546A6NGU7 BX005040.4-201ENST00000637145 1518 ntBASIC14.66□□□□□ -0.06
LINC01546A6NGU7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC14.66□□□□□ -0.06
LINC01546A6NGU7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC14.66□□□□□ -0.06
LINC01546A6NGU7 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC01546A6NGU7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
LINC01546A6NGU7 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC01546A6NGU7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC01546A6NGU7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC14.65□□□□□ -0.06
LINC01546A6NGU7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
LINC01546A6NGU7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC01546A6NGU7 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LINC01546A6NGU7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC14.65□□□□□ -0.06
LINC01546A6NGU7 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC14.65□□□□□ -0.06
LINC01546A6NGU7 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms