Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRIT2A6NDA9 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRIT2A6NDA9 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRIT2A6NDA9 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRIT2A6NDA9 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRIT2A6NDA9 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.73■□□□□ 0.75
LRIT2A6NDA9 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.73■□□□□ 0.75
LRIT2A6NDA9 IKBKGP1-201ENST00000612193 1073 ntBASIC19.73■□□□□ 0.75
LRIT2A6NDA9 AC011767.1-201ENST00000617410 1153 ntBASIC19.73■□□□□ 0.75
LRIT2A6NDA9 BID-214ENST00000617586 542 ntTSL 5 BASIC19.73■□□□□ 0.75
LRIT2A6NDA9 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
LRIT2A6NDA9 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
LRIT2A6NDA9 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LRIT2A6NDA9 AC011484.1-201ENST00000377652 1995 ntBASIC19.73■□□□□ 0.75
LRIT2A6NDA9 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LRIT2A6NDA9 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRIT2A6NDA9 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRIT2A6NDA9 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRIT2A6NDA9 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
LRIT2A6NDA9 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRIT2A6NDA9 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRIT2A6NDA9 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRIT2A6NDA9 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.72■□□□□ 0.75
LRIT2A6NDA9 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRIT2A6NDA9 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRIT2A6NDA9 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRIT2A6NDA9 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.72■□□□□ 0.75
LRIT2A6NDA9 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.72■□□□□ 0.75
LRIT2A6NDA9 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.72■□□□□ 0.75
LRIT2A6NDA9 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LRIT2A6NDA9 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.72■□□□□ 0.75
LRIT2A6NDA9 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
LRIT2A6NDA9 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LRIT2A6NDA9 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.72■□□□□ 0.75
LRIT2A6NDA9 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
LRIT2A6NDA9 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRIT2A6NDA9 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.72■□□□□ 0.75
LRIT2A6NDA9 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
LRIT2A6NDA9 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.71■□□□□ 0.75
LRIT2A6NDA9 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRIT2A6NDA9 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRIT2A6NDA9 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
LRIT2A6NDA9 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.71■□□□□ 0.75
LRIT2A6NDA9 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.71■□□□□ 0.75
LRIT2A6NDA9 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.71■□□□□ 0.75
LRIT2A6NDA9 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRIT2A6NDA9 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.71■□□□□ 0.75
LRIT2A6NDA9 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
LRIT2A6NDA9 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRIT2A6NDA9 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRIT2A6NDA9 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
LRIT2A6NDA9 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRIT2A6NDA9 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRIT2A6NDA9 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRIT2A6NDA9 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRIT2A6NDA9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.7■□□□□ 0.74
LRIT2A6NDA9 AC116050.2-201ENST00000612102 1779 ntBASIC19.7■□□□□ 0.74
LRIT2A6NDA9 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRIT2A6NDA9 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
LRIT2A6NDA9 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRIT2A6NDA9 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRIT2A6NDA9 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRIT2A6NDA9 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRIT2A6NDA9 DUX4L16-201ENST00000555130 1264 ntBASIC19.7■□□□□ 0.74
LRIT2A6NDA9 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.7■□□□□ 0.74
LRIT2A6NDA9 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.7■□□□□ 0.74
LRIT2A6NDA9 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
LRIT2A6NDA9 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRIT2A6NDA9 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRIT2A6NDA9 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRIT2A6NDA9 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.7■□□□□ 0.74
LRIT2A6NDA9 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRIT2A6NDA9 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LRIT2A6NDA9 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.69■□□□□ 0.74
LRIT2A6NDA9 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.69■□□□□ 0.74
LRIT2A6NDA9 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRIT2A6NDA9 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.69■□□□□ 0.74
LRIT2A6NDA9 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRIT2A6NDA9 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LRIT2A6NDA9 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.69■□□□□ 0.74
LRIT2A6NDA9 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LRIT2A6NDA9 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
LRIT2A6NDA9 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRIT2A6NDA9 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LRIT2A6NDA9 AC013268.1-206ENST00000638368 961 ntBASIC19.69■□□□□ 0.74
LRIT2A6NDA9 AC112229.1-201ENST00000639295 961 ntBASIC19.69■□□□□ 0.74
LRIT2A6NDA9 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRIT2A6NDA9 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LRIT2A6NDA9 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRIT2A6NDA9 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LRIT2A6NDA9 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRIT2A6NDA9 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
LRIT2A6NDA9 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LRIT2A6NDA9 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRIT2A6NDA9 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.68■□□□□ 0.74
LRIT2A6NDA9 AC006128.1-201ENST00000624704 1661 ntBASIC19.68■□□□□ 0.74
LRIT2A6NDA9 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
LRIT2A6NDA9 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.68■□□□□ 0.74
LRIT2A6NDA9 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRIT2A6NDA9 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms