Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SBNO1A3KN83 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC28.36■■■□□ 2.13
SBNO1A3KN83 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC28.36■■■□□ 2.13
SBNO1A3KN83 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
SBNO1A3KN83 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC28.36■■■□□ 2.13
SBNO1A3KN83 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC28.36■■■□□ 2.13
SBNO1A3KN83 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SBNO1A3KN83 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC28.35■■■□□ 2.13
SBNO1A3KN83 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC28.35■■■□□ 2.13
SBNO1A3KN83 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SBNO1A3KN83 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
SBNO1A3KN83 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SBNO1A3KN83 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC28.35■■■□□ 2.13
SBNO1A3KN83 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
SBNO1A3KN83 AC124016.1-201ENST00000609552 612 ntBASIC28.35■■■□□ 2.13
SBNO1A3KN83 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC28.35■■■□□ 2.13
SBNO1A3KN83 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
SBNO1A3KN83 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SBNO1A3KN83 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC28.34■■■□□ 2.13
SBNO1A3KN83 AC092053.2-201ENST00000640557 1818 ntBASIC28.34■■■□□ 2.13
SBNO1A3KN83 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC28.34■■■□□ 2.13
SBNO1A3KN83 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
SBNO1A3KN83 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SBNO1A3KN83 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
SBNO1A3KN83 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC28.34■■■□□ 2.13
SBNO1A3KN83 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC28.34■■■□□ 2.13
SBNO1A3KN83 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC28.34■■■□□ 2.13
SBNO1A3KN83 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
SBNO1A3KN83 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC28.34■■■□□ 2.13
SBNO1A3KN83 KRT18P21-201ENST00000515767 1272 ntBASIC28.34■■■□□ 2.13
SBNO1A3KN83 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC28.34■■■□□ 2.13
SBNO1A3KN83 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC28.34■■■□□ 2.13
SBNO1A3KN83 AL049637.2-201ENST00000641778 930 ntBASIC28.34■■■□□ 2.13
SBNO1A3KN83 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SBNO1A3KN83 KRT17P2-201ENST00000300992 1314 ntBASIC28.33■■■□□ 2.13
SBNO1A3KN83 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.13
SBNO1A3KN83 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC28.33■■■□□ 2.13
SBNO1A3KN83 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC28.33■■■□□ 2.13
SBNO1A3KN83 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC28.33■■■□□ 2.13
SBNO1A3KN83 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
SBNO1A3KN83 CBFB-203ENST00000561924 584 ntTSL 5 BASIC28.33■■■□□ 2.13
SBNO1A3KN83 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
SBNO1A3KN83 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
SBNO1A3KN83 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC28.33■■■□□ 2.13
SBNO1A3KN83 AC080038.3-201ENST00000623346 1952 ntBASIC28.33■■■□□ 2.13
SBNO1A3KN83 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SBNO1A3KN83 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC28.32■■■□□ 2.12
SBNO1A3KN83 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC28.32■■■□□ 2.12
SBNO1A3KN83 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SBNO1A3KN83 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC28.32■■■□□ 2.12
SBNO1A3KN83 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
SBNO1A3KN83 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
SBNO1A3KN83 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC28.32■■■□□ 2.12
SBNO1A3KN83 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC28.32■■■□□ 2.12
SBNO1A3KN83 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC28.32■■■□□ 2.12
SBNO1A3KN83 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC28.32■■■□□ 2.12
SBNO1A3KN83 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
SBNO1A3KN83 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SBNO1A3KN83 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
SBNO1A3KN83 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SBNO1A3KN83 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC28.32■■■□□ 2.12
SBNO1A3KN83 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
SBNO1A3KN83 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
SBNO1A3KN83 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
SBNO1A3KN83 C11orf96-202ENST00000528572 1834 ntBASIC28.31■■■□□ 2.12
SBNO1A3KN83 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC28.31■■■□□ 2.12
SBNO1A3KN83 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC28.31■■■□□ 2.12
SBNO1A3KN83 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
SBNO1A3KN83 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
SBNO1A3KN83 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC28.31■■■□□ 2.12
SBNO1A3KN83 DHDH-203ENST00000522614 776 ntTSL 5 BASIC28.31■■■□□ 2.12
SBNO1A3KN83 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
SBNO1A3KN83 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC28.31■■■□□ 2.12
SBNO1A3KN83 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC28.31■■■□□ 2.12
SBNO1A3KN83 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
SBNO1A3KN83 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
SBNO1A3KN83 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
SBNO1A3KN83 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
SBNO1A3KN83 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
SBNO1A3KN83 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SBNO1A3KN83 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
SBNO1A3KN83 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
SBNO1A3KN83 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC28.3■■■□□ 2.12
SBNO1A3KN83 LY6E-205ENST00000519611 635 ntTSL 3 BASIC28.3■■■□□ 2.12
SBNO1A3KN83 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC28.3■■■□□ 2.12
SBNO1A3KN83 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC28.3■■■□□ 2.12
SBNO1A3KN83 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC28.3■■■□□ 2.12
SBNO1A3KN83 AC012306.2-201ENST00000609350 630 ntBASIC28.3■■■□□ 2.12
SBNO1A3KN83 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
SBNO1A3KN83 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
SBNO1A3KN83 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC28.3■■■□□ 2.12
SBNO1A3KN83 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC28.3■■■□□ 2.12
SBNO1A3KN83 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SBNO1A3KN83 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
SBNO1A3KN83 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SBNO1A3KN83 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
SBNO1A3KN83 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SBNO1A3KN83 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
SBNO1A3KN83 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SBNO1A3KN83 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC28.29■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms