Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.72■□□□□ 0.91
CCDC162PA2VCL2 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.72■□□□□ 0.91
CCDC162PA2VCL2 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC162PA2VCL2 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC162PA2VCL2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC162PA2VCL2 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CCDC162PA2VCL2 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC162PA2VCL2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC162PA2VCL2 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC162PA2VCL2 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CCDC162PA2VCL2 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC162PA2VCL2 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC162PA2VCL2 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC162PA2VCL2 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC162PA2VCL2 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC162PA2VCL2 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC162PA2VCL2 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CCDC162PA2VCL2 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC162PA2VCL2 KRT18P5-201ENST00000436075 1291 ntBASIC20.71■□□□□ 0.91
CCDC162PA2VCL2 AC245052.3-201ENST00000450182 901 ntBASIC20.71■□□□□ 0.91
CCDC162PA2VCL2 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC162PA2VCL2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC162PA2VCL2 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.71■□□□□ 0.91
CCDC162PA2VCL2 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
CCDC162PA2VCL2 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC162PA2VCL2 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC162PA2VCL2 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC162PA2VCL2 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC162PA2VCL2 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC162PA2VCL2 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC162PA2VCL2 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC162PA2VCL2 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC162PA2VCL2 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC162PA2VCL2 AC006128.1-201ENST00000624704 1661 ntBASIC20.7■□□□□ 0.91
CCDC162PA2VCL2 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC162PA2VCL2 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC162PA2VCL2 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC162PA2VCL2 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC162PA2VCL2 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CCDC162PA2VCL2 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.7■□□□□ 0.9
CCDC162PA2VCL2 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.7■□□□□ 0.9
CCDC162PA2VCL2 UBE2DNL-204ENST00000602536 740 ntBASIC20.7■□□□□ 0.9
CCDC162PA2VCL2 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC162PA2VCL2 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC162PA2VCL2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC162PA2VCL2 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC162PA2VCL2 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC162PA2VCL2 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC162PA2VCL2 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC162PA2VCL2 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC162PA2VCL2 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC162PA2VCL2 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC162PA2VCL2 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC162PA2VCL2 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC162PA2VCL2 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC162PA2VCL2 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC162PA2VCL2 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC162PA2VCL2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC162PA2VCL2 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CCDC162PA2VCL2 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC162PA2VCL2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CCDC162PA2VCL2 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC162PA2VCL2 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC162PA2VCL2 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC162PA2VCL2 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.68■□□□□ 0.9
CCDC162PA2VCL2 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.68■□□□□ 0.9
CCDC162PA2VCL2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC162PA2VCL2 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC162PA2VCL2 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.68■□□□□ 0.9
CCDC162PA2VCL2 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CCDC162PA2VCL2 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC162PA2VCL2 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC162PA2VCL2 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC162PA2VCL2 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC162PA2VCL2 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC162PA2VCL2 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CCDC162PA2VCL2 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC162PA2VCL2 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC162PA2VCL2 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC162PA2VCL2 SLC7A5P1-201ENST00000568957 537 ntBASIC20.67■□□□□ 0.9
CCDC162PA2VCL2 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CCDC162PA2VCL2 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC162PA2VCL2 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC162PA2VCL2 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC162PA2VCL2 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC162PA2VCL2 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC162PA2VCL2 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC162PA2VCL2 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC162PA2VCL2 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC162PA2VCL2 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC162PA2VCL2 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC162PA2VCL2 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.66■□□□□ 0.9
CCDC162PA2VCL2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC162PA2VCL2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC162PA2VCL2 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC162PA2VCL2 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC162PA2VCL2 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC162PA2VCL2 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC162PA2VCL2 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC162PA2VCL2 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms