Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.72■■□□□ 1.07
TCRBV5S1A1TA0A578 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.72■■□□□ 1.07
TCRBV5S1A1TA0A578 AC007225.1-201ENST00000566331 1836 ntBASIC21.72■■□□□ 1.07
TCRBV5S1A1TA0A578 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.72■■□□□ 1.07
TCRBV5S1A1TA0A578 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
TCRBV5S1A1TA0A578 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TCRBV5S1A1TA0A578 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.72■■□□□ 1.07
TCRBV5S1A1TA0A578 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TCRBV5S1A1TA0A578 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TCRBV5S1A1TA0A578 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.71■■□□□ 1.07
TCRBV5S1A1TA0A578 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.71■■□□□ 1.07
TCRBV5S1A1TA0A578 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.71■■□□□ 1.07
TCRBV5S1A1TA0A578 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.71■■□□□ 1.07
TCRBV5S1A1TA0A578 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.71■■□□□ 1.07
TCRBV5S1A1TA0A578 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.71■■□□□ 1.07
TCRBV5S1A1TA0A578 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TCRBV5S1A1TA0A578 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.71■■□□□ 1.07
TCRBV5S1A1TA0A578 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
TCRBV5S1A1TA0A578 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
TCRBV5S1A1TA0A578 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.7■■□□□ 1.06
TCRBV5S1A1TA0A578 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.7■■□□□ 1.06
TCRBV5S1A1TA0A578 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TCRBV5S1A1TA0A578 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TCRBV5S1A1TA0A578 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.7■■□□□ 1.06
TCRBV5S1A1TA0A578 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.7■■□□□ 1.06
TCRBV5S1A1TA0A578 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TCRBV5S1A1TA0A578 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.7■■□□□ 1.06
TCRBV5S1A1TA0A578 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TCRBV5S1A1TA0A578 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.7■■□□□ 1.06
TCRBV5S1A1TA0A578 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.7■■□□□ 1.06
TCRBV5S1A1TA0A578 MYCNOS-205ENST00000641950 531 ntBASIC21.7■■□□□ 1.06
TCRBV5S1A1TA0A578 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TCRBV5S1A1TA0A578 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.7■■□□□ 1.06
TCRBV5S1A1TA0A578 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.7■■□□□ 1.06
TCRBV5S1A1TA0A578 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TCRBV5S1A1TA0A578 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
TCRBV5S1A1TA0A578 AP005212.1-201ENST00000581547 1997 ntBASIC21.7■■□□□ 1.06
TCRBV5S1A1TA0A578 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TCRBV5S1A1TA0A578 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TCRBV5S1A1TA0A578 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TCRBV5S1A1TA0A578 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
TCRBV5S1A1TA0A578 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TCRBV5S1A1TA0A578 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
TCRBV5S1A1TA0A578 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TCRBV5S1A1TA0A578 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TCRBV5S1A1TA0A578 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
TCRBV5S1A1TA0A578 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.69■■□□□ 1.06
TCRBV5S1A1TA0A578 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.69■■□□□ 1.06
TCRBV5S1A1TA0A578 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.69■■□□□ 1.06
TCRBV5S1A1TA0A578 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.69■■□□□ 1.06
TCRBV5S1A1TA0A578 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TCRBV5S1A1TA0A578 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TCRBV5S1A1TA0A578 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TCRBV5S1A1TA0A578 AC073314.1-201ENST00000568729 2216 ntBASIC21.69■■□□□ 1.06
TCRBV5S1A1TA0A578 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TCRBV5S1A1TA0A578 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.69■■□□□ 1.06
TCRBV5S1A1TA0A578 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.69■■□□□ 1.06
TCRBV5S1A1TA0A578 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TCRBV5S1A1TA0A578 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TCRBV5S1A1TA0A578 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.68■■□□□ 1.06
TCRBV5S1A1TA0A578 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TCRBV5S1A1TA0A578 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TCRBV5S1A1TA0A578 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TCRBV5S1A1TA0A578 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.68■■□□□ 1.06
TCRBV5S1A1TA0A578 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.68■■□□□ 1.06
TCRBV5S1A1TA0A578 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.68■■□□□ 1.06
TCRBV5S1A1TA0A578 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TCRBV5S1A1TA0A578 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.68■■□□□ 1.06
TCRBV5S1A1TA0A578 AC027702.1-201ENST00000563810 1770 ntBASIC21.68■■□□□ 1.06
TCRBV5S1A1TA0A578 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.68■■□□□ 1.06
TCRBV5S1A1TA0A578 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.68■■□□□ 1.06
TCRBV5S1A1TA0A578 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.68■■□□□ 1.06
TCRBV5S1A1TA0A578 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TCRBV5S1A1TA0A578 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TCRBV5S1A1TA0A578 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TCRBV5S1A1TA0A578 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TCRBV5S1A1TA0A578 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
TCRBV5S1A1TA0A578 AC116050.2-201ENST00000612102 1779 ntBASIC21.67■■□□□ 1.06
TCRBV5S1A1TA0A578 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.67■■□□□ 1.06
TCRBV5S1A1TA0A578 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
TCRBV5S1A1TA0A578 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.67■■□□□ 1.06
TCRBV5S1A1TA0A578 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TCRBV5S1A1TA0A578 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TCRBV5S1A1TA0A578 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.67■■□□□ 1.06
TCRBV5S1A1TA0A578 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
TCRBV5S1A1TA0A578 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.67■■□□□ 1.06
TCRBV5S1A1TA0A578 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.67■■□□□ 1.06
TCRBV5S1A1TA0A578 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.67■■□□□ 1.06
TCRBV5S1A1TA0A578 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TCRBV5S1A1TA0A578 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TCRBV5S1A1TA0A578 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TCRBV5S1A1TA0A578 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.66■■□□□ 1.06
TCRBV5S1A1TA0A578 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.66■■□□□ 1.06
TCRBV5S1A1TA0A578 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.66■■□□□ 1.06
TCRBV5S1A1TA0A578 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.66■■□□□ 1.06
TCRBV5S1A1TA0A578 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
TCRBV5S1A1TA0A578 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.66■■□□□ 1.06
TCRBV5S1A1TA0A578 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TCRBV5S1A1TA0A578 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TCRBV5S1A1TA0A578 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms