Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
IGHV4-28A0A0C4DH34 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC14.98□□□□□ -0.01
IGHV4-28A0A0C4DH34 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
IGHV4-28A0A0C4DH34 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
IGHV4-28A0A0C4DH34 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
IGHV4-28A0A0C4DH34 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
IGHV4-28A0A0C4DH34 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
IGHV4-28A0A0C4DH34 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
IGHV4-28A0A0C4DH34 CD44-222ENST00000526025 1052 ntTSL 2 BASIC14.98□□□□□ -0.01
IGHV4-28A0A0C4DH34 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC14.98□□□□□ -0.01
IGHV4-28A0A0C4DH34 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC14.98□□□□□ -0.01
IGHV4-28A0A0C4DH34 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
IGHV4-28A0A0C4DH34 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC14.98□□□□□ -0.01
IGHV4-28A0A0C4DH34 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC14.98□□□□□ -0.01
IGHV4-28A0A0C4DH34 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
IGHV4-28A0A0C4DH34 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
IGHV4-28A0A0C4DH34 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
IGHV4-28A0A0C4DH34 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
IGHV4-28A0A0C4DH34 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC14.98□□□□□ -0.01
IGHV4-28A0A0C4DH34 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
IGHV4-28A0A0C4DH34 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
IGHV4-28A0A0C4DH34 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
IGHV4-28A0A0C4DH34 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC14.98□□□□□ -0.01
IGHV4-28A0A0C4DH34 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
IGHV4-28A0A0C4DH34 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
IGHV4-28A0A0C4DH34 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IGHV4-28A0A0C4DH34 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IGHV4-28A0A0C4DH34 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
IGHV4-28A0A0C4DH34 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC14.97□□□□□ -0.01
IGHV4-28A0A0C4DH34 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC14.97□□□□□ -0.01
IGHV4-28A0A0C4DH34 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
IGHV4-28A0A0C4DH34 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
IGHV4-28A0A0C4DH34 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
IGHV4-28A0A0C4DH34 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
IGHV4-28A0A0C4DH34 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IGHV4-28A0A0C4DH34 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IGHV4-28A0A0C4DH34 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IGHV4-28A0A0C4DH34 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IGHV4-28A0A0C4DH34 TSPY6P-201ENST00000448518 926 ntBASIC14.97□□□□□ -0.01
IGHV4-28A0A0C4DH34 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
IGHV4-28A0A0C4DH34 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC14.97□□□□□ -0.01
IGHV4-28A0A0C4DH34 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
IGHV4-28A0A0C4DH34 AC016405.3-201ENST00000607710 860 ntBASIC14.97□□□□□ -0.01
IGHV4-28A0A0C4DH34 OR10C1-204ENST00000622521 1039 ntBASIC14.97□□□□□ -0.01
IGHV4-28A0A0C4DH34 TUB-203ENST00000534099 1759 ntTSL 2 BASIC14.97□□□□□ -0.01
IGHV4-28A0A0C4DH34 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IGHV4-28A0A0C4DH34 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC14.97□□□□□ -0.01
IGHV4-28A0A0C4DH34 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IGHV4-28A0A0C4DH34 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
IGHV4-28A0A0C4DH34 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IGHV4-28A0A0C4DH34 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IGHV4-28A0A0C4DH34 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
IGHV4-28A0A0C4DH34 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC14.97□□□□□ -0.01
IGHV4-28A0A0C4DH34 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
IGHV4-28A0A0C4DH34 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IGHV4-28A0A0C4DH34 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC14.96□□□□□ -0.01
IGHV4-28A0A0C4DH34 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
IGHV4-28A0A0C4DH34 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
IGHV4-28A0A0C4DH34 CLDN5-201ENST00000403084 2357 ntBASIC14.96□□□□□ -0.01
IGHV4-28A0A0C4DH34 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IGHV4-28A0A0C4DH34 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
IGHV4-28A0A0C4DH34 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IGHV4-28A0A0C4DH34 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
IGHV4-28A0A0C4DH34 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IGHV4-28A0A0C4DH34 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
IGHV4-28A0A0C4DH34 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC14.96□□□□□ -0.01
IGHV4-28A0A0C4DH34 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
IGHV4-28A0A0C4DH34 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IGHV4-28A0A0C4DH34 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
IGHV4-28A0A0C4DH34 PBX1-209ENST00000485769 834 ntTSL 2 BASIC14.96□□□□□ -0.01
IGHV4-28A0A0C4DH34 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
IGHV4-28A0A0C4DH34 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
IGHV4-28A0A0C4DH34 STK25-234ENST00000535007 2459 ntTSL 2 BASIC14.96□□□□□ -0.01
IGHV4-28A0A0C4DH34 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
IGHV4-28A0A0C4DH34 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IGHV4-28A0A0C4DH34 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
IGHV4-28A0A0C4DH34 PFKL-212ENST00000628044 129 ntTSL 3 BASIC14.96□□□□□ -0.01
IGHV4-28A0A0C4DH34 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
IGHV4-28A0A0C4DH34 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IGHV4-28A0A0C4DH34 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
IGHV4-28A0A0C4DH34 BID-212ENST00000614949 1988 ntTSL 5 BASIC14.96□□□□□ -0.01
IGHV4-28A0A0C4DH34 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
IGHV4-28A0A0C4DH34 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC14.96□□□□□ -0.02
IGHV4-28A0A0C4DH34 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
IGHV4-28A0A0C4DH34 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
IGHV4-28A0A0C4DH34 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC14.96□□□□□ -0.02
IGHV4-28A0A0C4DH34 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
IGHV4-28A0A0C4DH34 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
IGHV4-28A0A0C4DH34 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IGHV4-28A0A0C4DH34 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
IGHV4-28A0A0C4DH34 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IGHV4-28A0A0C4DH34 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
IGHV4-28A0A0C4DH34 AC244015.2-201ENST00000616358 1861 ntBASIC14.95□□□□□ -0.02
IGHV4-28A0A0C4DH34 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IGHV4-28A0A0C4DH34 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IGHV4-28A0A0C4DH34 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IGHV4-28A0A0C4DH34 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
IGHV4-28A0A0C4DH34 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IGHV4-28A0A0C4DH34 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
IGHV4-28A0A0C4DH34 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms