Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
TRAV17A0A0B4J275 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRAV17A0A0B4J275 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.83■□□□□ 0.61
TRAV17A0A0B4J275 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TRAV17A0A0B4J275 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
TRAV17A0A0B4J275 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
TRAV17A0A0B4J275 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV17A0A0B4J275 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.83■□□□□ 0.6
TRAV17A0A0B4J275 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
TRAV17A0A0B4J275 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV17A0A0B4J275 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.83■□□□□ 0.6
TRAV17A0A0B4J275 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
TRAV17A0A0B4J275 PNMA6B-201ENST00000538162 1200 ntBASIC18.83■□□□□ 0.6
TRAV17A0A0B4J275 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV17A0A0B4J275 AC092368.3-202ENST00000574180 1591 ntBASIC18.83■□□□□ 0.6
TRAV17A0A0B4J275 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV17A0A0B4J275 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.83■□□□□ 0.6
TRAV17A0A0B4J275 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV17A0A0B4J275 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV17A0A0B4J275 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV17A0A0B4J275 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV17A0A0B4J275 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV17A0A0B4J275 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.83■□□□□ 0.6
TRAV17A0A0B4J275 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV17A0A0B4J275 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV17A0A0B4J275 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV17A0A0B4J275 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV17A0A0B4J275 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV17A0A0B4J275 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV17A0A0B4J275 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV17A0A0B4J275 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAV17A0A0B4J275 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV17A0A0B4J275 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAV17A0A0B4J275 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV17A0A0B4J275 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV17A0A0B4J275 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.82■□□□□ 0.6
TRAV17A0A0B4J275 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV17A0A0B4J275 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV17A0A0B4J275 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TRAV17A0A0B4J275 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.81■□□□□ 0.6
TRAV17A0A0B4J275 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV17A0A0B4J275 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.81■□□□□ 0.6
TRAV17A0A0B4J275 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV17A0A0B4J275 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV17A0A0B4J275 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV17A0A0B4J275 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV17A0A0B4J275 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV17A0A0B4J275 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.81■□□□□ 0.6
TRAV17A0A0B4J275 UNC93B4-201ENST00000505679 747 ntBASIC18.81■□□□□ 0.6
TRAV17A0A0B4J275 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.81■□□□□ 0.6
TRAV17A0A0B4J275 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.81■□□□□ 0.6
TRAV17A0A0B4J275 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TRAV17A0A0B4J275 AC105020.6-201ENST00000621523 1217 ntBASIC18.81■□□□□ 0.6
TRAV17A0A0B4J275 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV17A0A0B4J275 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.81■□□□□ 0.6
TRAV17A0A0B4J275 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.81■□□□□ 0.6
TRAV17A0A0B4J275 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV17A0A0B4J275 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV17A0A0B4J275 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
TRAV17A0A0B4J275 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV17A0A0B4J275 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.81■□□□□ 0.6
TRAV17A0A0B4J275 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TRAV17A0A0B4J275 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV17A0A0B4J275 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TRAV17A0A0B4J275 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV17A0A0B4J275 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRAV17A0A0B4J275 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.8■□□□□ 0.6
TRAV17A0A0B4J275 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV17A0A0B4J275 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV17A0A0B4J275 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV17A0A0B4J275 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TRAV17A0A0B4J275 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.8■□□□□ 0.6
TRAV17A0A0B4J275 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV17A0A0B4J275 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
TRAV17A0A0B4J275 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.8■□□□□ 0.6
TRAV17A0A0B4J275 KRT17P3-201ENST00000420566 1262 ntBASIC18.8■□□□□ 0.6
TRAV17A0A0B4J275 AC008403.3-201ENST00000598924 454 ntBASIC18.8■□□□□ 0.6
TRAV17A0A0B4J275 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.8■□□□□ 0.6
TRAV17A0A0B4J275 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.8■□□□□ 0.6
TRAV17A0A0B4J275 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV17A0A0B4J275 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.8■□□□□ 0.6
TRAV17A0A0B4J275 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV17A0A0B4J275 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV17A0A0B4J275 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.79■□□□□ 0.6
TRAV17A0A0B4J275 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV17A0A0B4J275 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV17A0A0B4J275 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TRAV17A0A0B4J275 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV17A0A0B4J275 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV17A0A0B4J275 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.79■□□□□ 0.6
TRAV17A0A0B4J275 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.79■□□□□ 0.6
TRAV17A0A0B4J275 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.79■□□□□ 0.6
TRAV17A0A0B4J275 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.79■□□□□ 0.6
TRAV17A0A0B4J275 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.79■□□□□ 0.6
TRAV17A0A0B4J275 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.79■□□□□ 0.6
TRAV17A0A0B4J275 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV17A0A0B4J275 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.78■□□□□ 0.6
TRAV17A0A0B4J275 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV17A0A0B4J275 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV17A0A0B4J275 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms