Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IGKV1D-43A0A0B4J1Z2 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.34■□□□□ 0.53
IGKV1D-43A0A0B4J1Z2 FEM1AP1-201ENST00000431297 1995 ntBASIC18.34■□□□□ 0.53
IGKV1D-43A0A0B4J1Z2 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
IGKV1D-43A0A0B4J1Z2 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
IGKV1D-43A0A0B4J1Z2 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IGKV1D-43A0A0B4J1Z2 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
IGKV1D-43A0A0B4J1Z2 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
IGKV1D-43A0A0B4J1Z2 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
IGKV1D-43A0A0B4J1Z2 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
IGKV1D-43A0A0B4J1Z2 AC026271.2-201ENST00000428091 497 ntBASIC18.34■□□□□ 0.53
IGKV1D-43A0A0B4J1Z2 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
IGKV1D-43A0A0B4J1Z2 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IGKV1D-43A0A0B4J1Z2 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IGKV1D-43A0A0B4J1Z2 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.34■□□□□ 0.53
IGKV1D-43A0A0B4J1Z2 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
IGKV1D-43A0A0B4J1Z2 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
IGKV1D-43A0A0B4J1Z2 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
IGKV1D-43A0A0B4J1Z2 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
IGKV1D-43A0A0B4J1Z2 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
IGKV1D-43A0A0B4J1Z2 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
IGKV1D-43A0A0B4J1Z2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
IGKV1D-43A0A0B4J1Z2 LINC01006-201ENST00000333319 2292 ntBASIC18.33■□□□□ 0.53
IGKV1D-43A0A0B4J1Z2 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.33■□□□□ 0.53
IGKV1D-43A0A0B4J1Z2 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
IGKV1D-43A0A0B4J1Z2 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.33■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 AC034268.1-201ENST00000441047 882 ntBASIC18.33■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 NTF6G-201ENST00000591094 616 ntBASIC18.33■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.33■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.33■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.32■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.32■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.32■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 AC092667.1-201ENST00000434301 2586 ntBASIC18.32■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.32■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.32■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.32■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.32■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 AC120498.10-201ENST00000621827 505 ntBASIC18.32■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.32■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 AC011484.1-201ENST00000377652 1995 ntBASIC18.31■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 AC019069.1-201ENST00000610008 1333 ntBASIC18.31■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.31■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.31■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.31■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.31■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.31■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 KRT18P20-201ENST00000548986 1279 ntBASIC18.31■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.31■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 RARRES2P6-201ENST00000567333 442 ntBASIC18.31■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.31■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.31■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.31■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.31■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.31■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 AC073314.1-201ENST00000568729 2216 ntBASIC18.3■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 PKD1P6-201ENST00000343738 4769 ntBASIC18.3■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.3■□□□□ 0.52
IGKV1D-43A0A0B4J1Z2 KRT19P1-201ENST00000405746 1186 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms