Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV6-7A0A0A0MS04 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TRBV6-7A0A0A0MS04 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV6-7A0A0A0MS04 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.35■□□□□ 0.37
TRBV6-7A0A0A0MS04 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV6-7A0A0A0MS04 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV6-7A0A0A0MS04 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV6-7A0A0A0MS04 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV6-7A0A0A0MS04 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.35■□□□□ 0.37
TRBV6-7A0A0A0MS04 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.35■□□□□ 0.37
TRBV6-7A0A0A0MS04 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.35■□□□□ 0.37
TRBV6-7A0A0A0MS04 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV6-7A0A0A0MS04 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV6-7A0A0A0MS04 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TRBV6-7A0A0A0MS04 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV6-7A0A0A0MS04 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV6-7A0A0A0MS04 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRBV6-7A0A0A0MS04 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV6-7A0A0A0MS04 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV6-7A0A0A0MS04 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TRBV6-7A0A0A0MS04 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV6-7A0A0A0MS04 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV6-7A0A0A0MS04 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV6-7A0A0A0MS04 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.34■□□□□ 0.37
TRBV6-7A0A0A0MS04 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV6-7A0A0A0MS04 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV6-7A0A0A0MS04 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
TRBV6-7A0A0A0MS04 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV6-7A0A0A0MS04 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV6-7A0A0A0MS04 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV6-7A0A0A0MS04 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV6-7A0A0A0MS04 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV6-7A0A0A0MS04 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.34■□□□□ 0.37
TRBV6-7A0A0A0MS04 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TRBV6-7A0A0A0MS04 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TRBV6-7A0A0A0MS04 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.34■□□□□ 0.37
TRBV6-7A0A0A0MS04 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV6-7A0A0A0MS04 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.34■□□□□ 0.37
TRBV6-7A0A0A0MS04 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV6-7A0A0A0MS04 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV6-7A0A0A0MS04 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.34■□□□□ 0.37
TRBV6-7A0A0A0MS04 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.34■□□□□ 0.37
TRBV6-7A0A0A0MS04 AC135279.3-201ENST00000610945 1311 ntBASIC17.34■□□□□ 0.37
TRBV6-7A0A0A0MS04 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TRBV6-7A0A0A0MS04 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.34■□□□□ 0.37
TRBV6-7A0A0A0MS04 BX323043.1-201ENST00000641006 1765 ntBASIC17.34■□□□□ 0.37
TRBV6-7A0A0A0MS04 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV6-7A0A0A0MS04 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.34■□□□□ 0.37
TRBV6-7A0A0A0MS04 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV6-7A0A0A0MS04 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV6-7A0A0A0MS04 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.33■□□□□ 0.37
TRBV6-7A0A0A0MS04 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV6-7A0A0A0MS04 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV6-7A0A0A0MS04 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
TRBV6-7A0A0A0MS04 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.33■□□□□ 0.37
TRBV6-7A0A0A0MS04 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV6-7A0A0A0MS04 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.33■□□□□ 0.37
TRBV6-7A0A0A0MS04 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV6-7A0A0A0MS04 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV6-7A0A0A0MS04 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
TRBV6-7A0A0A0MS04 AC087289.5-201ENST00000586076 3175 ntBASIC17.33■□□□□ 0.37
TRBV6-7A0A0A0MS04 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV6-7A0A0A0MS04 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV6-7A0A0A0MS04 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV6-7A0A0A0MS04 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.33■□□□□ 0.36
TRBV6-7A0A0A0MS04 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV6-7A0A0A0MS04 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.33■□□□□ 0.36
TRBV6-7A0A0A0MS04 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.33■□□□□ 0.36
TRBV6-7A0A0A0MS04 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.33■□□□□ 0.36
TRBV6-7A0A0A0MS04 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TRBV6-7A0A0A0MS04 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV6-7A0A0A0MS04 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.33■□□□□ 0.36
TRBV6-7A0A0A0MS04 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV6-7A0A0A0MS04 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV6-7A0A0A0MS04 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV6-7A0A0A0MS04 SMG8-203ENST00000578922 2178 ntBASIC17.33■□□□□ 0.36
TRBV6-7A0A0A0MS04 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
TRBV6-7A0A0A0MS04 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV6-7A0A0A0MS04 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV6-7A0A0A0MS04 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV6-7A0A0A0MS04 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.32■□□□□ 0.36
TRBV6-7A0A0A0MS04 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV6-7A0A0A0MS04 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV6-7A0A0A0MS04 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV6-7A0A0A0MS04 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV6-7A0A0A0MS04 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV6-7A0A0A0MS04 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV6-7A0A0A0MS04 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV6-7A0A0A0MS04 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV6-7A0A0A0MS04 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TRBV6-7A0A0A0MS04 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.32■□□□□ 0.36
TRBV6-7A0A0A0MS04 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.32■□□□□ 0.36
TRBV6-7A0A0A0MS04 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV6-7A0A0A0MS04 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV6-7A0A0A0MS04 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV6-7A0A0A0MS04 AC005224.4-201ENST00000583262 1652 ntBASIC17.32■□□□□ 0.36
TRBV6-7A0A0A0MS04 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TRBV6-7A0A0A0MS04 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TRBV6-7A0A0A0MS04 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV6-7A0A0A0MS04 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms