Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV18A0A075B6X5 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV18A0A075B6X5 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.8■□□□□ 0.44
TRAV18A0A075B6X5 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.8■□□□□ 0.44
TRAV18A0A075B6X5 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.8■□□□□ 0.44
TRAV18A0A075B6X5 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV18A0A075B6X5 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV18A0A075B6X5 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
TRAV18A0A075B6X5 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.8■□□□□ 0.44
TRAV18A0A075B6X5 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV18A0A075B6X5 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV18A0A075B6X5 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
TRAV18A0A075B6X5 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV18A0A075B6X5 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV18A0A075B6X5 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TRAV18A0A075B6X5 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TRAV18A0A075B6X5 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV18A0A075B6X5 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV18A0A075B6X5 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TRAV18A0A075B6X5 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.79■□□□□ 0.44
TRAV18A0A075B6X5 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV18A0A075B6X5 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
TRAV18A0A075B6X5 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.79■□□□□ 0.44
TRAV18A0A075B6X5 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV18A0A075B6X5 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV18A0A075B6X5 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.79■□□□□ 0.44
TRAV18A0A075B6X5 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.79■□□□□ 0.44
TRAV18A0A075B6X5 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
TRAV18A0A075B6X5 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.79■□□□□ 0.44
TRAV18A0A075B6X5 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV18A0A075B6X5 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV18A0A075B6X5 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV18A0A075B6X5 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.79■□□□□ 0.44
TRAV18A0A075B6X5 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.79■□□□□ 0.44
TRAV18A0A075B6X5 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.79■□□□□ 0.44
TRAV18A0A075B6X5 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TRAV18A0A075B6X5 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV18A0A075B6X5 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV18A0A075B6X5 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.78■□□□□ 0.44
TRAV18A0A075B6X5 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV18A0A075B6X5 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV18A0A075B6X5 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV18A0A075B6X5 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.78■□□□□ 0.44
TRAV18A0A075B6X5 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV18A0A075B6X5 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV18A0A075B6X5 AL512408.1-201ENST00000569378 2000 ntBASIC17.78■□□□□ 0.44
TRAV18A0A075B6X5 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV18A0A075B6X5 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.78■□□□□ 0.44
TRAV18A0A075B6X5 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.78■□□□□ 0.44
TRAV18A0A075B6X5 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV18A0A075B6X5 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.78■□□□□ 0.44
TRAV18A0A075B6X5 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV18A0A075B6X5 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.78■□□□□ 0.44
TRAV18A0A075B6X5 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC17.78■□□□□ 0.44
TRAV18A0A075B6X5 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV18A0A075B6X5 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV18A0A075B6X5 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.78■□□□□ 0.44
TRAV18A0A075B6X5 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV18A0A075B6X5 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TRAV18A0A075B6X5 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.78■□□□□ 0.44
TRAV18A0A075B6X5 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV18A0A075B6X5 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV18A0A075B6X5 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.77■□□□□ 0.44
TRAV18A0A075B6X5 AIRN-201ENST00000601203 4374 ntBASIC17.77■□□□□ 0.44
TRAV18A0A075B6X5 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.77■□□□□ 0.44
TRAV18A0A075B6X5 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV18A0A075B6X5 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV18A0A075B6X5 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV18A0A075B6X5 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV18A0A075B6X5 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV18A0A075B6X5 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV18A0A075B6X5 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.44
TRAV18A0A075B6X5 UNC93B8-201ENST00000511903 705 ntBASIC17.77■□□□□ 0.44
TRAV18A0A075B6X5 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV18A0A075B6X5 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV18A0A075B6X5 FP700111.2-201ENST00000619190 1892 ntBASIC17.77■□□□□ 0.43
TRAV18A0A075B6X5 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV18A0A075B6X5 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
TRAV18A0A075B6X5 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV18A0A075B6X5 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
TRAV18A0A075B6X5 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV18A0A075B6X5 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV18A0A075B6X5 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV18A0A075B6X5 AC087289.5-201ENST00000586076 3175 ntBASIC17.77■□□□□ 0.43
TRAV18A0A075B6X5 AC138932.1-201ENST00000534164 6830 ntBASIC17.76■□□□□ 0.43
TRAV18A0A075B6X5 AL162377.1-201ENST00000618844 1793 ntBASIC17.76■□□□□ 0.43
TRAV18A0A075B6X5 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV18A0A075B6X5 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TRAV18A0A075B6X5 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TRAV18A0A075B6X5 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV18A0A075B6X5 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.76■□□□□ 0.43
TRAV18A0A075B6X5 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV18A0A075B6X5 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.76■□□□□ 0.43
TRAV18A0A075B6X5 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV18A0A075B6X5 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.76■□□□□ 0.43
TRAV18A0A075B6X5 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.76■□□□□ 0.43
TRAV18A0A075B6X5 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TRAV18A0A075B6X5 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.76■□□□□ 0.43
TRAV18A0A075B6X5 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TRAV18A0A075B6X5 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms