Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 SALL4-202ENST00000371539 1151 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SNX18Q96RF0 MMP26-202ENST00000380390 1189 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
SNX18Q96RF0 TRAV8-2-201ENST00000390434 566 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
SNX18Q96RF0 MT1P1-201ENST00000396160 183 ntBASIC9.05□□□□□ -0.96
SNX18Q96RF0 RHOA-203ENST00000422781 961 ntTSL 2 BASIC9.05□□□□□ -0.96
SNX18Q96RF0 TARM1-201ENST00000432826 897 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
SNX18Q96RF0 AC073911.1-202ENST00000443154 1151 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SNX18Q96RF0 TMEM213-204ENST00000458494 572 ntAPPRIS ALT2 TSL 4 BASIC9.05□□□□□ -0.96
SNX18Q96RF0 RPL34P17-201ENST00000472160 347 ntBASIC9.05□□□□□ -0.96
SNX18Q96RF0 SNRPG-208ENST00000482975 1093 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SNX18Q96RF0 KCNMB3-207ENST00000497599 1004 ntTSL 2 BASIC9.05□□□□□ -0.96
SNX18Q96RF0 PTPN20-214ENST00000503851 545 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SNX18Q96RF0 PTPN20-220ENST00000508715 586 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SNX18Q96RF0 SLC25A5P9-201ENST00000509905 910 ntBASIC9.05□□□□□ -0.96
SNX18Q96RF0 ALG1L11P-201ENST00000511660 450 ntBASIC9.05□□□□□ -0.96
SNX18Q96RF0 PTPN20-227ENST00000513159 450 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SNX18Q96RF0 RNA5-8SP6-201ENST00000515896 152 ntBASIC9.05□□□□□ -0.96
SNX18Q96RF0 LETM2-213ENST00000527710 1261 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SNX18Q96RF0 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC9.05□□□□□ -0.96
SNX18Q96RF0 AC002094.3-201ENST00000555059 851 ntAPPRIS P1 TSL 4 BASIC9.05□□□□□ -0.96
SNX18Q96RF0 RN7SL693P-201ENST00000579576 279 ntBASIC9.05□□□□□ -0.96
SNX18Q96RF0 MIR4327-201ENST00000581194 85 ntBASIC9.05□□□□□ -0.96
SNX18Q96RF0 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC9.05□□□□□ -0.96
SNX18Q96RF0 BNIP3P36-201ENST00000603076 574 ntBASIC9.05□□□□□ -0.96
SNX18Q96RF0 BBIP1-210ENST00000605742 569 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SNX18Q96RF0 OR52R1-201ENST00000624978 948 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
SNX18Q96RF0 AC060814.6-201ENST00000626448 752 ntTSL 3 BASIC9.05□□□□□ -0.96
SNX18Q96RF0 LINC00694-203ENST00000636468 808 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
SNX18Q96RF0 TAB2-AS1-202ENST00000637865 794 ntTSL 5 BASIC9.05□□□□□ -0.96
SNX18Q96RF0 HCG18-240ENST00000454269 2430 ntTSL 2 BASIC9.05□□□□□ -0.96
SNX18Q96RF0 ZNF774-202ENST00000379090 5613 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SNX18Q96RF0 SS18-205ENST00000542420 2321 ntTSL 2 BASIC9.05□□□□□ -0.96
SNX18Q96RF0 LRRC2-202ENST00000395905 5100 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SNX18Q96RF0 RBBP8-204ENST00000399722 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SNX18Q96RF0 SRP54-208ENST00000555557 1949 ntTSL 2 BASIC9.05□□□□□ -0.96
SNX18Q96RF0 AL138847.2-201ENST00000624477 1819 ntBASIC9.05□□□□□ -0.96
SNX18Q96RF0 POC5-203ENST00000446329 1728 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SNX18Q96RF0 STIP1P3-201ENST00000394563 1624 ntBASIC9.05□□□□□ -0.96
SNX18Q96RF0 LINC01358-207ENST00000634502 2575 ntTSL 5 BASIC9.05□□□□□ -0.96
SNX18Q96RF0 AC067931.3-201ENST00000624905 1518 ntBASIC9.05□□□□□ -0.96
SNX18Q96RF0 IL1R1-203ENST00000409589 3544 ntTSL 5 BASIC9.05□□□□□ -0.96
SNX18Q96RF0 NUDT5-207ENST00000491614 3433 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SNX18Q96RF0 PPARGC1A-206ENST00000507380 2385 ntTSL 2 BASIC9.05□□□□□ -0.96
SNX18Q96RF0 USP54-201ENST00000339859 6247 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
SNX18Q96RF0 LPIN1-201ENST00000256720 5384 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SNX18Q96RF0 FAM74A4-203ENST00000621724 1862 ntTSL 2 BASIC9.04□□□□□ -0.96
SNX18Q96RF0 KBTBD11-OT1-204ENST00000635855 6169 ntAPPRIS P5 TSL 5 BASIC9.04□□□□□ -0.96
SNX18Q96RF0 HAO2-205ENST00000622548 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SNX18Q96RF0 CSGALNACT1-203ENST00000454498 4232 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SNX18Q96RF0 FZD10-AS1-201ENST00000505807 10193 ntTSL 2 BASIC9.04□□□□□ -0.96
SNX18Q96RF0 APOL1-205ENST00000422706 2901 ntAPPRIS ALT2 TSL 3 BASIC9.04□□□□□ -0.96
SNX18Q96RF0 RPS10-201ENST00000326199 644 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SNX18Q96RF0 SMIM23-201ENST00000330910 468 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
SNX18Q96RF0 AL138963.1-201ENST00000420693 310 ntTSL 5 BASIC9.04□□□□□ -0.96
SNX18Q96RF0 AL355001.1-201ENST00000422148 444 ntTSL 5 BASIC9.04□□□□□ -0.96
SNX18Q96RF0 AL731897.1-201ENST00000433546 396 ntTSL 5 BASIC9.04□□□□□ -0.96
SNX18Q96RF0 AC006012.1-201ENST00000436600 691 ntTSL 2 BASIC9.04□□□□□ -0.96
SNX18Q96RF0 LINC02521-201ENST00000440848 834 ntTSL 2 BASIC9.04□□□□□ -0.96
SNX18Q96RF0 AL022313.2-201ENST00000442579 372 ntTSL 3 BASIC9.04□□□□□ -0.96
SNX18Q96RF0 LINC01736-201ENST00000445339 654 ntTSL 2 BASIC9.04□□□□□ -0.96
SNX18Q96RF0 RN7SL581P-201ENST00000477181 309 ntBASIC9.04□□□□□ -0.96
SNX18Q96RF0 AL442663.1-201ENST00000478589 364 ntBASIC9.04□□□□□ -0.96
SNX18Q96RF0 IFT22-209ENST00000498704 917 ntTSL 2 BASIC9.04□□□□□ -0.96
SNX18Q96RF0 AC008549.3-201ENST00000505098 404 ntBASIC9.04□□□□□ -0.96
SNX18Q96RF0 AC005823.1-201ENST00000510059 585 ntTSL 4 BASIC9.04□□□□□ -0.96
SNX18Q96RF0 ACA64.6-201ENST00000516310 117 ntBASIC9.04□□□□□ -0.96
SNX18Q96RF0 AC115837.1-201ENST00000517662 1001 ntBASIC9.04□□□□□ -0.96
SNX18Q96RF0 AC022568.1-201ENST00000518222 833 ntTSL 4 BASIC9.04□□□□□ -0.96
SNX18Q96RF0 MTND6P3-201ENST00000520612 542 ntBASIC9.04□□□□□ -0.96
SNX18Q96RF0 SSPN-207ENST00000540266 587 ntTSL 4 BASIC9.04□□□□□ -0.96
SNX18Q96RF0 AC078950.1-202ENST00000542062 562 ntTSL 4 BASIC9.04□□□□□ -0.96
SNX18Q96RF0 AC073913.1-201ENST00000544240 912 ntBASIC9.04□□□□□ -0.96
SNX18Q96RF0 AC009093.3-201ENST00000567688 351 ntBASIC9.04□□□□□ -0.96
SNX18Q96RF0 AC079210.1-201ENST00000589826 384 ntTSL 2 BASIC9.04□□□□□ -0.96
SNX18Q96RF0 AC079598.2-201ENST00000599191 1294 ntBASIC9.04□□□□□ -0.96
SNX18Q96RF0 SSX3-204ENST00000612497 1030 ntTSL 5 BASIC9.04□□□□□ -0.96
SNX18Q96RF0 Metazoa_SRP.161-201ENST00000617435 256 ntBASIC9.04□□□□□ -0.96
SNX18Q96RF0 AC092278.1-201ENST00000621951 745 ntBASIC9.04□□□□□ -0.96
SNX18Q96RF0 AL807761.4-201ENST00000439901 2277 ntTSL 2 BASIC9.04□□□□□ -0.96
SNX18Q96RF0 ATP12A-202ENST00000381946 4258 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SNX18Q96RF0 CCT5P2-201ENST00000432974 1624 ntBASIC9.04□□□□□ -0.96
SNX18Q96RF0 AP003027.1-202ENST00000366160 2076 ntBASIC9.04□□□□□ -0.96
SNX18Q96RF0 ANKRD55-201ENST00000341048 2502 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
SNX18Q96RF0 CD36-208ENST00000433696 1985 ntTSL 5 BASIC9.04□□□□□ -0.96
SNX18Q96RF0 PGM3-205ENST00000506587 1971 ntTSL 2 BASIC9.04□□□□□ -0.96
SNX18Q96RF0 AC108120.3-201ENST00000505953 1510 ntBASIC9.04□□□□□ -0.96
SNX18Q96RF0 CALCOCO2-215ENST00000509507 1512 ntTSL 2 BASIC9.04□□□□□ -0.96
SNX18Q96RF0 BMS1P2-202ENST00000532854 1858 ntTSL 5 BASIC9.04□□□□□ -0.96
SNX18Q96RF0 AC004491.1-201ENST00000623029 1882 ntBASIC9.04□□□□□ -0.96
SNX18Q96RF0 DMBT1-203ENST00000344338 7656 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
SNX18Q96RF0 DMBT1-205ENST00000368955 7656 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
SNX18Q96RF0 TRPM3-203ENST00000358082 4710 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
SNX18Q96RF0 TRPM3-213ENST00000396285 4701 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
SNX18Q96RF0 TRPM3-214ENST00000396292 4740 ntAPPRIS P4 TSL 5 BASIC9.04□□□□□ -0.96
SNX18Q96RF0 TRPM3-215ENST00000408909 4701 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
SNX18Q96RF0 AC005906.2-215ENST00000639700 1408 ntTSL 5 BASIC9.04□□□□□ -0.96
SNX18Q96RF0 SEL1L-201ENST00000336735 7925 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SNX18Q96RF0 AC008543.1-201ENST00000344893 3383 ntTSL 2 BASIC9.04□□□□□ -0.96
SNX18Q96RF0 ZSCAN9-202ENST00000425468 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
SNX18Q96RF0 KCNMA1-240ENST00000638575 3720 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms