Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ABCA8-203ENST00000430352 5823 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
SNX18Q96RF0 METAP2-210ENST00000551840 1874 ntAPPRIS ALT1 TSL 5 BASIC9.17□□□□□ -0.94
SNX18Q96RF0 GPR161-210ENST00000546300 7388 ntTSL 2 BASIC9.17□□□□□ -0.94
SNX18Q96RF0 MSH2-202ENST00000406134 3628 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SNX18Q96RF0 MTMR2-204ENST00000409459 3420 ntTSL 5 BASIC9.17□□□□□ -0.94
SNX18Q96RF0 FLJ22447-201ENST00000229465 1655 ntTSL 2 BASIC9.17□□□□□ -0.94
SNX18Q96RF0 CHEK1-218ENST00000544373 1653 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SNX18Q96RF0 NET1-202ENST00000380359 3253 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SNX18Q96RF0 MEFV-202ENST00000339854 2959 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
SNX18Q96RF0 TTTY14-201ENST00000324446 1495 ntTSL 2 BASIC9.17□□□□□ -0.94
SNX18Q96RF0 EIF2B3-203ENST00000372183 1457 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SNX18Q96RF0 BORA-203ENST00000390667 2936 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
SNX18Q96RF0 SLC24A1-201ENST00000261892 5768 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
SNX18Q96RF0 DDX55P1-201ENST00000603334 1414 ntBASIC9.17□□□□□ -0.94
SNX18Q96RF0 ENO1P1-201ENST00000366587 1304 ntBASIC9.17□□□□□ -0.94
SNX18Q96RF0 AC046158.4-201ENST00000623121 1347 ntBASIC9.17□□□□□ -0.94
SNX18Q96RF0 C12orf45-201ENST00000280749 459 ntTSL 3 BASIC9.17□□□□□ -0.94
SNX18Q96RF0 OR10G3-201ENST00000303532 942 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
SNX18Q96RF0 TNNT2-205ENST00000367318 1122 ntAPPRIS P4 TSL 5 BASIC9.17□□□□□ -0.94
SNX18Q96RF0 MTIF3-201ENST00000381116 1104 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
SNX18Q96RF0 TRBV6-8-201ENST00000390376 341 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
SNX18Q96RF0 AC119677.1-201ENST00000414199 471 ntTSL 3 BASIC9.17□□□□□ -0.94
SNX18Q96RF0 TUBB8P11-201ENST00000415481 1058 ntBASIC9.17□□□□□ -0.94
SNX18Q96RF0 AC011747.2-201ENST00000418358 1036 ntTSL 5 BASIC9.17□□□□□ -0.94
SNX18Q96RF0 LINC01241-201ENST00000423326 1237 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SNX18Q96RF0 RPSAP28-201ENST00000437188 874 ntBASIC9.17□□□□□ -0.94
SNX18Q96RF0 LINC00475-207ENST00000438322 424 ntTSL 3 BASIC9.17□□□□□ -0.94
SNX18Q96RF0 MEF2BNBP1-201ENST00000502742 330 ntBASIC9.17□□□□□ -0.94
SNX18Q96RF0 RNU2-24P-201ENST00000516830 143 ntBASIC9.17□□□□□ -0.94
SNX18Q96RF0 IGKV2OR22-3-201ENST00000521969 360 ntBASIC9.17□□□□□ -0.94
SNX18Q96RF0 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC9.17□□□□□ -0.94
SNX18Q96RF0 AC079602.2-201ENST00000538389 283 ntBASIC9.17□□□□□ -0.94
SNX18Q96RF0 AC009509.3-201ENST00000542428 314 ntBASIC9.17□□□□□ -0.94
SNX18Q96RF0 ANKS1B-205ENST00000546568 1281 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SNX18Q96RF0 NDUFA12-204ENST00000547157 276 ntTSL 2 BASIC9.17□□□□□ -0.94
SNX18Q96RF0 AC048344.1-201ENST00000551974 407 ntTSL 4 BASIC9.17□□□□□ -0.94
SNX18Q96RF0 U91319.1-201ENST00000571619 764 ntTSL 3 BASIC9.17□□□□□ -0.94
SNX18Q96RF0 AC239868.3-201ENST00000577853 1234 ntBASIC9.17□□□□□ -0.94
SNX18Q96RF0 GRB2-208ENST00000578961 687 ntTSL 3 BASIC9.17□□□□□ -0.94
SNX18Q96RF0 AC024267.5-201ENST00000579154 599 ntBASIC9.17□□□□□ -0.94
SNX18Q96RF0 SLFN12-202ENST00000394562 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SNX18Q96RF0 LINC01747-202ENST00000441568 2320 ntTSL 2 BASIC9.17□□□□□ -0.94
SNX18Q96RF0 ZNF217-201ENST00000302342 5633 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SNX18Q96RF0 RAP2C-205ENST00000620646 3341 ntTSL 5 BASIC9.17□□□□□ -0.94
SNX18Q96RF0 SPEF2-201ENST00000282469 3026 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SNX18Q96RF0 CDKN2B-AS1-203ENST00000428597 3835 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SNX18Q96RF0 LPIN1-207ENST00000425416 5582 ntTSL 2 BASIC9.17□□□□□ -0.94
SNX18Q96RF0 TMEM168-206ENST00000454074 2659 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
SNX18Q96RF0 LETM2-207ENST00000523983 1776 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
SNX18Q96RF0 KCNMA1-AS1-206ENST00000600782 1755 ntTSL 5 BASIC9.17□□□□□ -0.94
SNX18Q96RF0 GPHN-201ENST00000315266 4193 ntAPPRIS ALT1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SNX18Q96RF0 ZFP1-202ENST00000393430 3250 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SNX18Q96RF0 FAM193A-203ENST00000502458 4083 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
SNX18Q96RF0 AC114980.1-201ENST00000505668 3157 ntBASIC9.16□□□□□ -0.94
SNX18Q96RF0 USP17L12-201ENST00000415041 1593 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 USP17L10-201ENST00000417945 1593 ntAPPRIS P2 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 USP17L13-201ENST00000429667 1593 ntAPPRIS P2 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 USP17L11-201ENST00000457736 1593 ntAPPRIS P2 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 USP17L30-201ENST00000504104 1593 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 USP17L18-201ENST00000504209 1593 ntAPPRIS P2 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 USP17L24-201ENST00000504481 1593 ntAPPRIS P2 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 USP17L28-201ENST00000504543 1593 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 USP17L20-201ENST00000506151 1593 ntAPPRIS P2 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 USP17L21-201ENST00000506414 1593 ntAPPRIS P2 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 USP17L16P-201ENST00000507155 1593 ntBASIC9.16□□□□□ -0.94
SNX18Q96RF0 USP17L5-201ENST00000507227 1593 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 USP17L9P-201ENST00000508843 1593 ntBASIC9.16□□□□□ -0.94
SNX18Q96RF0 USP17L25-201ENST00000509271 1593 ntAPPRIS P2 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 USP17L26-201ENST00000509660 1593 ntAPPRIS P2 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 USP17L22-201ENST00000511280 1593 ntAPPRIS P2 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 USP17L17-201ENST00000511568 1593 ntAPPRIS P2 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 USP17L29-201ENST00000511681 1593 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 USP17L19-201ENST00000515566 1593 ntAPPRIS P2 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 USP17L27-201ENST00000515574 1593 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 DNAH9-201ENST00000262442 13750 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SNX18Q96RF0 CEACAM22P-201ENST00000446628 3016 ntTSL 2 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 LINC01936-201ENST00000421976 2952 ntTSL 4 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 STAG1-210ENST00000629124 4322 ntTSL 5 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 NPIPB7-202ENST00000452313 1406 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 RACK1-227ENST00000512805 1403 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SNX18Q96RF0 DENND5B-203ENST00000536562 4291 ntTSL 2 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 ERC1-213ENST00000543086 9241 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
SNX18Q96RF0 RPL23-206ENST00000479035 2821 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SNX18Q96RF0 NEDD4L-203ENST00000357895 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
SNX18Q96RF0 PPP3CB-202ENST00000360663 3501 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
SNX18Q96RF0 IKZF3-217ENST00000623724 9787 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
SNX18Q96RF0 PSEN1-205ENST00000406768 4062 ntTSL 2 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 UTP11-201ENST00000373014 2019 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SNX18Q96RF0 IL1RAPL1-201ENST00000302196 1314 ntTSL 5 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 COL4A6-202ENST00000372216 6570 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
SNX18Q96RF0 PPIG-202ENST00000409714 2615 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
SNX18Q96RF0 ABI1-201ENST00000346832 3289 ntTSL 2 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 YPEL5-203ENST00000379520 2560 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
SNX18Q96RF0 RNA5S12-201ENST00000362400 119 ntBASIC9.16□□□□□ -0.94
SNX18Q96RF0 RNA5S11-201ENST00000362464 119 ntBASIC9.16□□□□□ -0.94
SNX18Q96RF0 RNA5S3-201ENST00000362467 119 ntBASIC9.16□□□□□ -0.94
SNX18Q96RF0 RNA5S1-201ENST00000362482 119 ntBASIC9.16□□□□□ -0.94
SNX18Q96RF0 RNA5S5-201ENST00000362526 119 ntBASIC9.16□□□□□ -0.94
SNX18Q96RF0 RNA5S10-201ENST00000363040 119 ntBASIC9.16□□□□□ -0.94
SNX18Q96RF0 RNA5S8-201ENST00000363473 119 ntBASIC9.16□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms