Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01558Q9Y6Z2 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01558Q9Y6Z2 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01558Q9Y6Z2 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC10.84□□□□□ -0.67
LINC01558Q9Y6Z2 AL138781.2-201ENST00000617896 1843 ntBASIC10.84□□□□□ -0.67
LINC01558Q9Y6Z2 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01558Q9Y6Z2 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01558Q9Y6Z2 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01558Q9Y6Z2 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC01558Q9Y6Z2 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01558Q9Y6Z2 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC10.84□□□□□ -0.67
LINC01558Q9Y6Z2 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
LINC01558Q9Y6Z2 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
LINC01558Q9Y6Z2 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01558Q9Y6Z2 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01558Q9Y6Z2 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01558Q9Y6Z2 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01558Q9Y6Z2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC10.84□□□□□ -0.67
LINC01558Q9Y6Z2 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01558Q9Y6Z2 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01558Q9Y6Z2 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01558Q9Y6Z2 AC141586.5-201ENST00000624546 2050 ntBASIC10.84□□□□□ -0.67
LINC01558Q9Y6Z2 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC01558Q9Y6Z2 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01558Q9Y6Z2 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01558Q9Y6Z2 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC01558Q9Y6Z2 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC10.84□□□□□ -0.67
LINC01558Q9Y6Z2 AC112907.3-201ENST00000577781 2400 ntBASIC10.84□□□□□ -0.67
LINC01558Q9Y6Z2 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01558Q9Y6Z2 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01558Q9Y6Z2 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LINC01558Q9Y6Z2 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
LINC01558Q9Y6Z2 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01558Q9Y6Z2 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01558Q9Y6Z2 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
LINC01558Q9Y6Z2 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC10.83□□□□□ -0.68
LINC01558Q9Y6Z2 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01558Q9Y6Z2 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01558Q9Y6Z2 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01558Q9Y6Z2 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01558Q9Y6Z2 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01558Q9Y6Z2 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01558Q9Y6Z2 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01558Q9Y6Z2 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC01558Q9Y6Z2 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01558Q9Y6Z2 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC01558Q9Y6Z2 CD37-213ENST00000598095 1598 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC01558Q9Y6Z2 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC10.83□□□□□ -0.68
LINC01558Q9Y6Z2 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01558Q9Y6Z2 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC10.83□□□□□ -0.68
LINC01558Q9Y6Z2 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01558Q9Y6Z2 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01558Q9Y6Z2 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01558Q9Y6Z2 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01558Q9Y6Z2 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01558Q9Y6Z2 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
LINC01558Q9Y6Z2 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01558Q9Y6Z2 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
LINC01558Q9Y6Z2 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01558Q9Y6Z2 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC10.83□□□□□ -0.68
LINC01558Q9Y6Z2 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01558Q9Y6Z2 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01558Q9Y6Z2 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01558Q9Y6Z2 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01558Q9Y6Z2 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01558Q9Y6Z2 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
LINC01558Q9Y6Z2 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01558Q9Y6Z2 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LINC01558Q9Y6Z2 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
LINC01558Q9Y6Z2 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01558Q9Y6Z2 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01558Q9Y6Z2 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01558Q9Y6Z2 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC10.82□□□□□ -0.68
LINC01558Q9Y6Z2 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01558Q9Y6Z2 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01558Q9Y6Z2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01558Q9Y6Z2 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC10.82□□□□□ -0.68
LINC01558Q9Y6Z2 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01558Q9Y6Z2 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01558Q9Y6Z2 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
LINC01558Q9Y6Z2 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01558Q9Y6Z2 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01558Q9Y6Z2 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01558Q9Y6Z2 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC10.82□□□□□ -0.68
LINC01558Q9Y6Z2 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC10.82□□□□□ -0.68
LINC01558Q9Y6Z2 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01558Q9Y6Z2 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01558Q9Y6Z2 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC10.82□□□□□ -0.68
LINC01558Q9Y6Z2 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01558Q9Y6Z2 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01558Q9Y6Z2 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC10.82□□□□□ -0.68
LINC01558Q9Y6Z2 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC10.82□□□□□ -0.68
LINC01558Q9Y6Z2 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01558Q9Y6Z2 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
LINC01558Q9Y6Z2 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC10.82□□□□□ -0.68
LINC01558Q9Y6Z2 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
LINC01558Q9Y6Z2 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01558Q9Y6Z2 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC01558Q9Y6Z2 HTR7P1-202ENST00000624664 4411 ntBASIC10.82□□□□□ -0.68
LINC01558Q9Y6Z2 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms