Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 AC116562.4-201ENST00000641316 2276 ntBASIC18.47■□□□□ 0.55
LSM2Q9Y333 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LSM2Q9Y333 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LSM2Q9Y333 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LSM2Q9Y333 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LSM2Q9Y333 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
LSM2Q9Y333 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.47■□□□□ 0.55
LSM2Q9Y333 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LSM2Q9Y333 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LSM2Q9Y333 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LSM2Q9Y333 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
LSM2Q9Y333 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.47■□□□□ 0.55
LSM2Q9Y333 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.46■□□□□ 0.55
LSM2Q9Y333 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LSM2Q9Y333 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.46■□□□□ 0.55
LSM2Q9Y333 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.46■□□□□ 0.55
LSM2Q9Y333 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSM2Q9Y333 TSPY9P-201ENST00000440215 945 ntBASIC18.46■□□□□ 0.55
LSM2Q9Y333 TSPY11P-201ENST00000442607 1045 ntBASIC18.46■□□□□ 0.55
LSM2Q9Y333 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.46■□□□□ 0.55
LSM2Q9Y333 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSM2Q9Y333 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSM2Q9Y333 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSM2Q9Y333 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
LSM2Q9Y333 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSM2Q9Y333 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSM2Q9Y333 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSM2Q9Y333 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSM2Q9Y333 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSM2Q9Y333 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSM2Q9Y333 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSM2Q9Y333 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSM2Q9Y333 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LSM2Q9Y333 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.46■□□□□ 0.55
LSM2Q9Y333 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LSM2Q9Y333 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LSM2Q9Y333 AC098818.2-201ENST00000564925 2320 ntBASIC18.45■□□□□ 0.54
LSM2Q9Y333 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LSM2Q9Y333 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LSM2Q9Y333 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LSM2Q9Y333 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.45■□□□□ 0.54
LSM2Q9Y333 BX005040.4-201ENST00000637145 1518 ntBASIC18.45■□□□□ 0.54
LSM2Q9Y333 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LSM2Q9Y333 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.45■□□□□ 0.54
LSM2Q9Y333 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LSM2Q9Y333 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.45■□□□□ 0.54
LSM2Q9Y333 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LSM2Q9Y333 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
LSM2Q9Y333 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.45■□□□□ 0.54
LSM2Q9Y333 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.45■□□□□ 0.54
LSM2Q9Y333 MIR6724-1-201ENST00000616420 92 ntBASIC18.45■□□□□ 0.54
LSM2Q9Y333 MIR6724-2-201ENST00000616483 92 ntBASIC18.45■□□□□ 0.54
LSM2Q9Y333 MIR6724-4-201ENST00000617390 92 ntBASIC18.45■□□□□ 0.54
LSM2Q9Y333 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.45■□□□□ 0.54
LSM2Q9Y333 MIR6724-3-201ENST00000622482 92 ntBASIC18.45■□□□□ 0.54
LSM2Q9Y333 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LSM2Q9Y333 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
LSM2Q9Y333 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LSM2Q9Y333 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LSM2Q9Y333 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LSM2Q9Y333 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LSM2Q9Y333 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
LSM2Q9Y333 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LSM2Q9Y333 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
LSM2Q9Y333 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
LSM2Q9Y333 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
LSM2Q9Y333 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
LSM2Q9Y333 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
LSM2Q9Y333 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.44■□□□□ 0.54
LSM2Q9Y333 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LSM2Q9Y333 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.44■□□□□ 0.54
LSM2Q9Y333 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LSM2Q9Y333 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LSM2Q9Y333 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LSM2Q9Y333 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LSM2Q9Y333 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LSM2Q9Y333 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LSM2Q9Y333 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.44■□□□□ 0.54
LSM2Q9Y333 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LSM2Q9Y333 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.44■□□□□ 0.54
LSM2Q9Y333 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LSM2Q9Y333 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LSM2Q9Y333 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
LSM2Q9Y333 AC125437.2-201ENST00000625180 2167 ntBASIC18.44■□□□□ 0.54
LSM2Q9Y333 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LSM2Q9Y333 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LSM2Q9Y333 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
LSM2Q9Y333 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LSM2Q9Y333 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LSM2Q9Y333 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LSM2Q9Y333 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LSM2Q9Y333 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
LSM2Q9Y333 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.43■□□□□ 0.54
LSM2Q9Y333 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LSM2Q9Y333 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.43■□□□□ 0.54
LSM2Q9Y333 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.43■□□□□ 0.54
LSM2Q9Y333 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.43■□□□□ 0.54
LSM2Q9Y333 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LSM2Q9Y333 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
LSM2Q9Y333 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms