Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 BID-203ENST00000399765 1879 ntTSL 2 BASIC14.45□□□□□ -0.1
UBE2D4Q9Y2X8 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
UBE2D4Q9Y2X8 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC14.45□□□□□ -0.1
UBE2D4Q9Y2X8 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC14.45□□□□□ -0.1
UBE2D4Q9Y2X8 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
UBE2D4Q9Y2X8 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
UBE2D4Q9Y2X8 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC14.45□□□□□ -0.1
UBE2D4Q9Y2X8 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
UBE2D4Q9Y2X8 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC14.45□□□□□ -0.1
UBE2D4Q9Y2X8 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBE2D4Q9Y2X8 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBE2D4Q9Y2X8 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC14.45□□□□□ -0.1
UBE2D4Q9Y2X8 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBE2D4Q9Y2X8 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
UBE2D4Q9Y2X8 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
UBE2D4Q9Y2X8 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBE2D4Q9Y2X8 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBE2D4Q9Y2X8 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBE2D4Q9Y2X8 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
UBE2D4Q9Y2X8 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBE2D4Q9Y2X8 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
UBE2D4Q9Y2X8 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
UBE2D4Q9Y2X8 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC14.44□□□□□ -0.1
UBE2D4Q9Y2X8 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBE2D4Q9Y2X8 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC14.44□□□□□ -0.1
UBE2D4Q9Y2X8 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC14.44□□□□□ -0.1
UBE2D4Q9Y2X8 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC14.44□□□□□ -0.1
UBE2D4Q9Y2X8 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC14.44□□□□□ -0.1
UBE2D4Q9Y2X8 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC14.44□□□□□ -0.1
UBE2D4Q9Y2X8 SMUG1P1-201ENST00000590640 811 ntBASIC14.44□□□□□ -0.1
UBE2D4Q9Y2X8 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBE2D4Q9Y2X8 RARG-204ENST00000543726 1779 ntTSL 2 BASIC14.44□□□□□ -0.1
UBE2D4Q9Y2X8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC14.44□□□□□ -0.1
UBE2D4Q9Y2X8 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBE2D4Q9Y2X8 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBE2D4Q9Y2X8 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBE2D4Q9Y2X8 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBE2D4Q9Y2X8 DET1-207ENST00000564406 2315 ntTSL 2 BASIC14.43□□□□□ -0.1
UBE2D4Q9Y2X8 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBE2D4Q9Y2X8 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBE2D4Q9Y2X8 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC14.43□□□□□ -0.1
UBE2D4Q9Y2X8 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC14.43□□□□□ -0.1
UBE2D4Q9Y2X8 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UBE2D4Q9Y2X8 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC14.43□□□□□ -0.1
UBE2D4Q9Y2X8 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBE2D4Q9Y2X8 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UBE2D4Q9Y2X8 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UBE2D4Q9Y2X8 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBE2D4Q9Y2X8 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC14.43□□□□□ -0.1
UBE2D4Q9Y2X8 GRAMD4P7-201ENST00000578182 1232 ntBASIC14.43□□□□□ -0.1
UBE2D4Q9Y2X8 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC14.43□□□□□ -0.1
UBE2D4Q9Y2X8 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC14.43□□□□□ -0.1
UBE2D4Q9Y2X8 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
UBE2D4Q9Y2X8 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBE2D4Q9Y2X8 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
UBE2D4Q9Y2X8 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
UBE2D4Q9Y2X8 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBE2D4Q9Y2X8 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UBE2D4Q9Y2X8 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC14.43□□□□□ -0.1
UBE2D4Q9Y2X8 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBE2D4Q9Y2X8 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UBE2D4Q9Y2X8 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC14.42□□□□□ -0.1
UBE2D4Q9Y2X8 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC14.42□□□□□ -0.1
UBE2D4Q9Y2X8 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBE2D4Q9Y2X8 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBE2D4Q9Y2X8 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBE2D4Q9Y2X8 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBE2D4Q9Y2X8 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBE2D4Q9Y2X8 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
UBE2D4Q9Y2X8 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC14.42□□□□□ -0.1
UBE2D4Q9Y2X8 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBE2D4Q9Y2X8 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC14.42□□□□□ -0.1
UBE2D4Q9Y2X8 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC14.42□□□□□ -0.1
UBE2D4Q9Y2X8 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
UBE2D4Q9Y2X8 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UBE2D4Q9Y2X8 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
UBE2D4Q9Y2X8 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC14.42□□□□□ -0.1
UBE2D4Q9Y2X8 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
UBE2D4Q9Y2X8 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBE2D4Q9Y2X8 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC14.42□□□□□ -0.1
UBE2D4Q9Y2X8 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC14.42□□□□□ -0.1
UBE2D4Q9Y2X8 FP700111.2-201ENST00000619190 1892 ntBASIC14.42□□□□□ -0.1
UBE2D4Q9Y2X8 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
UBE2D4Q9Y2X8 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBE2D4Q9Y2X8 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC14.41□□□□□ -0.1
UBE2D4Q9Y2X8 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBE2D4Q9Y2X8 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC14.41□□□□□ -0.1
UBE2D4Q9Y2X8 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC14.41□□□□□ -0.1
UBE2D4Q9Y2X8 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBE2D4Q9Y2X8 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBE2D4Q9Y2X8 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBE2D4Q9Y2X8 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC14.41□□□□□ -0.1
UBE2D4Q9Y2X8 SNX3-202ENST00000349379 890 ntTSL 2 BASIC14.41□□□□□ -0.1
UBE2D4Q9Y2X8 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
UBE2D4Q9Y2X8 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
UBE2D4Q9Y2X8 SF1-220ENST00000626028 704 ntTSL 2 BASIC14.41□□□□□ -0.1
UBE2D4Q9Y2X8 ASL-203ENST00000380839 1765 ntTSL 5 BASIC14.41□□□□□ -0.1
UBE2D4Q9Y2X8 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBE2D4Q9Y2X8 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
UBE2D4Q9Y2X8 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms