Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NCKAP1Q9Y2A7 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NCKAP1Q9Y2A7 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.86■□□□□ 0.93
NCKAP1Q9Y2A7 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.86■□□□□ 0.93
NCKAP1Q9Y2A7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.86■□□□□ 0.93
NCKAP1Q9Y2A7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NCKAP1Q9Y2A7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NCKAP1Q9Y2A7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NCKAP1Q9Y2A7 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NCKAP1Q9Y2A7 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
NCKAP1Q9Y2A7 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NCKAP1Q9Y2A7 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.85■□□□□ 0.93
NCKAP1Q9Y2A7 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NCKAP1Q9Y2A7 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NCKAP1Q9Y2A7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NCKAP1Q9Y2A7 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.85■□□□□ 0.93
NCKAP1Q9Y2A7 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.85■□□□□ 0.93
NCKAP1Q9Y2A7 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.85■□□□□ 0.93
NCKAP1Q9Y2A7 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.85■□□□□ 0.93
NCKAP1Q9Y2A7 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.85■□□□□ 0.93
NCKAP1Q9Y2A7 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
NCKAP1Q9Y2A7 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.85■□□□□ 0.93
NCKAP1Q9Y2A7 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NCKAP1Q9Y2A7 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.85■□□□□ 0.93
NCKAP1Q9Y2A7 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.85■□□□□ 0.93
NCKAP1Q9Y2A7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
NCKAP1Q9Y2A7 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.85■□□□□ 0.93
NCKAP1Q9Y2A7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.85■□□□□ 0.93
NCKAP1Q9Y2A7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NCKAP1Q9Y2A7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NCKAP1Q9Y2A7 AC242852.2-201ENST00000615738 1807 ntBASIC20.85■□□□□ 0.93
NCKAP1Q9Y2A7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NCKAP1Q9Y2A7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.85■□□□□ 0.93
NCKAP1Q9Y2A7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.85■□□□□ 0.93
NCKAP1Q9Y2A7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NCKAP1Q9Y2A7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.85■□□□□ 0.93
NCKAP1Q9Y2A7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
NCKAP1Q9Y2A7 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.84■□□□□ 0.93
NCKAP1Q9Y2A7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NCKAP1Q9Y2A7 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NCKAP1Q9Y2A7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NCKAP1Q9Y2A7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NCKAP1Q9Y2A7 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NCKAP1Q9Y2A7 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.84■□□□□ 0.93
NCKAP1Q9Y2A7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.84■□□□□ 0.93
NCKAP1Q9Y2A7 AC007322.3-201ENST00000426526 701 ntBASIC20.84■□□□□ 0.93
NCKAP1Q9Y2A7 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.84■□□□□ 0.93
NCKAP1Q9Y2A7 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.84■□□□□ 0.93
NCKAP1Q9Y2A7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.84■□□□□ 0.93
NCKAP1Q9Y2A7 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
NCKAP1Q9Y2A7 ITM2C-210ENST00000620962 501 ntBASIC20.84■□□□□ 0.93
NCKAP1Q9Y2A7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NCKAP1Q9Y2A7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NCKAP1Q9Y2A7 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NCKAP1Q9Y2A7 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
NCKAP1Q9Y2A7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
NCKAP1Q9Y2A7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NCKAP1Q9Y2A7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
NCKAP1Q9Y2A7 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.83■□□□□ 0.93
NCKAP1Q9Y2A7 AL355472.2-201ENST00000422958 438 ntBASIC20.83■□□□□ 0.93
NCKAP1Q9Y2A7 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.83■□□□□ 0.93
NCKAP1Q9Y2A7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.83■□□□□ 0.93
NCKAP1Q9Y2A7 CYP2T3P-201ENST00000601990 817 ntBASIC20.83■□□□□ 0.93
NCKAP1Q9Y2A7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.83■□□□□ 0.93
NCKAP1Q9Y2A7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NCKAP1Q9Y2A7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.83■□□□□ 0.92
NCKAP1Q9Y2A7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NCKAP1Q9Y2A7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
NCKAP1Q9Y2A7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
NCKAP1Q9Y2A7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
NCKAP1Q9Y2A7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NCKAP1Q9Y2A7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NCKAP1Q9Y2A7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NCKAP1Q9Y2A7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.82■□□□□ 0.92
NCKAP1Q9Y2A7 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NCKAP1Q9Y2A7 MCRIP2P1-201ENST00000394346 511 ntBASIC20.82■□□□□ 0.92
NCKAP1Q9Y2A7 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.82■□□□□ 0.92
NCKAP1Q9Y2A7 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.82■□□□□ 0.92
NCKAP1Q9Y2A7 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.82■□□□□ 0.92
NCKAP1Q9Y2A7 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NCKAP1Q9Y2A7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.82■□□□□ 0.92
NCKAP1Q9Y2A7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
NCKAP1Q9Y2A7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NCKAP1Q9Y2A7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NCKAP1Q9Y2A7 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NCKAP1Q9Y2A7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
NCKAP1Q9Y2A7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
NCKAP1Q9Y2A7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.81■□□□□ 0.92
NCKAP1Q9Y2A7 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NCKAP1Q9Y2A7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.81■□□□□ 0.92
NCKAP1Q9Y2A7 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.81■□□□□ 0.92
NCKAP1Q9Y2A7 AL589743.5-201ENST00000616611 1050 ntBASIC20.81■□□□□ 0.92
NCKAP1Q9Y2A7 AC066615.1-201ENST00000640911 628 ntBASIC20.81■□□□□ 0.92
NCKAP1Q9Y2A7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
NCKAP1Q9Y2A7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NCKAP1Q9Y2A7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NCKAP1Q9Y2A7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NCKAP1Q9Y2A7 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NCKAP1Q9Y2A7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NCKAP1Q9Y2A7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms