Protein–RNA interactions for Protein: Q9UHC3

ASIC3, Acid-sensing ion channel 3, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC3Q9UHC3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ASIC3Q9UHC3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ASIC3Q9UHC3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ASIC3Q9UHC3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
ASIC3Q9UHC3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ASIC3Q9UHC3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
ASIC3Q9UHC3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
ASIC3Q9UHC3 AL391422.3-201ENST00000603791 2761 ntBASIC21.49■■□□□ 1.03
ASIC3Q9UHC3 AC009237.3-201ENST00000393279 1427 ntBASIC21.49■■□□□ 1.03
ASIC3Q9UHC3 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.49■■□□□ 1.03
ASIC3Q9UHC3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ASIC3Q9UHC3 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.49■■□□□ 1.03
ASIC3Q9UHC3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ASIC3Q9UHC3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.49■■□□□ 1.03
ASIC3Q9UHC3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.49■■□□□ 1.03
ASIC3Q9UHC3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
ASIC3Q9UHC3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
ASIC3Q9UHC3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
ASIC3Q9UHC3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.48■■□□□ 1.03
ASIC3Q9UHC3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.48■■□□□ 1.03
ASIC3Q9UHC3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ASIC3Q9UHC3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ASIC3Q9UHC3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.48■■□□□ 1.03
ASIC3Q9UHC3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ASIC3Q9UHC3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
ASIC3Q9UHC3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ASIC3Q9UHC3 AL136116.3-201ENST00000402907 1138 ntBASIC21.48■■□□□ 1.03
ASIC3Q9UHC3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ASIC3Q9UHC3 AC233992.3-201ENST00000607491 485 ntBASIC21.48■■□□□ 1.03
ASIC3Q9UHC3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
ASIC3Q9UHC3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
ASIC3Q9UHC3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.48■■□□□ 1.03
ASIC3Q9UHC3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ASIC3Q9UHC3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ASIC3Q9UHC3 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
ASIC3Q9UHC3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ASIC3Q9UHC3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.47■■□□□ 1.03
ASIC3Q9UHC3 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ASIC3Q9UHC3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ASIC3Q9UHC3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
ASIC3Q9UHC3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ASIC3Q9UHC3 IGHV3-19-201ENST00000521488 291 ntBASIC21.47■■□□□ 1.03
ASIC3Q9UHC3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ASIC3Q9UHC3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ASIC3Q9UHC3 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ASIC3Q9UHC3 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.47■■□□□ 1.03
ASIC3Q9UHC3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ASIC3Q9UHC3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ASIC3Q9UHC3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ASIC3Q9UHC3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.47■■□□□ 1.03
ASIC3Q9UHC3 PCDHAC2-203ENST00000615316 3011 ntBASIC21.47■■□□□ 1.03
ASIC3Q9UHC3 AC055733.4-201ENST00000638462 1354 ntBASIC21.47■■□□□ 1.03
ASIC3Q9UHC3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.46■■□□□ 1.03
ASIC3Q9UHC3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ASIC3Q9UHC3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.46■■□□□ 1.03
ASIC3Q9UHC3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
ASIC3Q9UHC3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
ASIC3Q9UHC3 AC027702.1-201ENST00000563810 1770 ntBASIC21.46■■□□□ 1.03
ASIC3Q9UHC3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ASIC3Q9UHC3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
ASIC3Q9UHC3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ASIC3Q9UHC3 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ASIC3Q9UHC3 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ASIC3Q9UHC3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
ASIC3Q9UHC3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ASIC3Q9UHC3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
ASIC3Q9UHC3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
ASIC3Q9UHC3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ASIC3Q9UHC3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
ASIC3Q9UHC3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
ASIC3Q9UHC3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.46■■□□□ 1.03
ASIC3Q9UHC3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
ASIC3Q9UHC3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.03
ASIC3Q9UHC3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
ASIC3Q9UHC3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.45■■□□□ 1.03
ASIC3Q9UHC3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
ASIC3Q9UHC3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ASIC3Q9UHC3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ASIC3Q9UHC3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.45■■□□□ 1.02
ASIC3Q9UHC3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
ASIC3Q9UHC3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
ASIC3Q9UHC3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
ASIC3Q9UHC3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
ASIC3Q9UHC3 UNC93B3-201ENST00000308076 687 ntBASIC21.45■■□□□ 1.02
ASIC3Q9UHC3 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ASIC3Q9UHC3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ASIC3Q9UHC3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ASIC3Q9UHC3 AC007225.1-201ENST00000566331 1836 ntBASIC21.45■■□□□ 1.02
ASIC3Q9UHC3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.45■■□□□ 1.02
ASIC3Q9UHC3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ASIC3Q9UHC3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.45■■□□□ 1.02
ASIC3Q9UHC3 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ASIC3Q9UHC3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
ASIC3Q9UHC3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ASIC3Q9UHC3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.44■■□□□ 1.02
ASIC3Q9UHC3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.44■■□□□ 1.02
ASIC3Q9UHC3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.44■■□□□ 1.02
ASIC3Q9UHC3 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ASIC3Q9UHC3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ASIC3Q9UHC3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms