Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC88CQ9P219 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC88CQ9P219 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CCDC88CQ9P219 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.85■□□□□ 0.77
CCDC88CQ9P219 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC88CQ9P219 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC88CQ9P219 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC88CQ9P219 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC88CQ9P219 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC88CQ9P219 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CCDC88CQ9P219 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC88CQ9P219 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC88CQ9P219 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC88CQ9P219 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC88CQ9P219 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC88CQ9P219 AC008175.2-201ENST00000612840 297 ntBASIC19.84■□□□□ 0.77
CCDC88CQ9P219 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC88CQ9P219 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC88CQ9P219 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CCDC88CQ9P219 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC88CQ9P219 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
CCDC88CQ9P219 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CCDC88CQ9P219 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC88CQ9P219 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC88CQ9P219 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC88CQ9P219 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.83■□□□□ 0.77
CCDC88CQ9P219 AC061975.6-201ENST00000579045 1553 ntBASIC19.83■□□□□ 0.77
CCDC88CQ9P219 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC88CQ9P219 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC88CQ9P219 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC88CQ9P219 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.83■□□□□ 0.76
CCDC88CQ9P219 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC88CQ9P219 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC88CQ9P219 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC88CQ9P219 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.83■□□□□ 0.76
CCDC88CQ9P219 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC88CQ9P219 CYP2T1P-201ENST00000432607 1285 ntBASIC19.83■□□□□ 0.76
CCDC88CQ9P219 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
CCDC88CQ9P219 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC88CQ9P219 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.83■□□□□ 0.76
CCDC88CQ9P219 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.83■□□□□ 0.76
CCDC88CQ9P219 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC88CQ9P219 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC88CQ9P219 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC88CQ9P219 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC88CQ9P219 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC88CQ9P219 AL157384.1-201ENST00000445995 2473 ntBASIC19.82■□□□□ 0.76
CCDC88CQ9P219 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.82■□□□□ 0.76
CCDC88CQ9P219 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC88CQ9P219 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC88CQ9P219 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.82■□□□□ 0.76
CCDC88CQ9P219 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC88CQ9P219 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CCDC88CQ9P219 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC88CQ9P219 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC88CQ9P219 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
CCDC88CQ9P219 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC88CQ9P219 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CCDC88CQ9P219 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC88CQ9P219 POU5F1P4-201ENST00000413175 1085 ntBASIC19.81■□□□□ 0.76
CCDC88CQ9P219 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.81■□□□□ 0.76
CCDC88CQ9P219 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.81■□□□□ 0.76
CCDC88CQ9P219 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC88CQ9P219 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC88CQ9P219 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC88CQ9P219 AC016405.3-201ENST00000607710 860 ntBASIC19.81■□□□□ 0.76
CCDC88CQ9P219 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC88CQ9P219 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC88CQ9P219 KRT16P2-201ENST00000414673 1423 ntBASIC19.81■□□□□ 0.76
CCDC88CQ9P219 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC88CQ9P219 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC88CQ9P219 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC88CQ9P219 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC88CQ9P219 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC88CQ9P219 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC88CQ9P219 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CCDC88CQ9P219 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CCDC88CQ9P219 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.81■□□□□ 0.76
CCDC88CQ9P219 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.81■□□□□ 0.76
CCDC88CQ9P219 AC053503.5-201ENST00000601508 636 ntBASIC19.81■□□□□ 0.76
CCDC88CQ9P219 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CCDC88CQ9P219 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC88CQ9P219 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC88CQ9P219 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
CCDC88CQ9P219 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC88CQ9P219 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC88CQ9P219 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.8■□□□□ 0.76
CCDC88CQ9P219 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC88CQ9P219 AL138781.1-201ENST00000566567 1274 ntBASIC19.8■□□□□ 0.76
CCDC88CQ9P219 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.8■□□□□ 0.76
CCDC88CQ9P219 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC88CQ9P219 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC88CQ9P219 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC88CQ9P219 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC88CQ9P219 MKRN4P-201ENST00000444706 1521 ntBASIC19.8■□□□□ 0.76
CCDC88CQ9P219 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC88CQ9P219 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC88CQ9P219 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC88CQ9P219 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC88CQ9P219 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms