Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 RASA4CP-201ENST00000424092 1398 ntBASIC19.61■□□□□ 0.73
SLC6A13Q9NSD5 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.61■□□□□ 0.73
SLC6A13Q9NSD5 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC6A13Q9NSD5 AC020907.5-201ENST00000624372 1936 ntBASIC19.61■□□□□ 0.73
SLC6A13Q9NSD5 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A13Q9NSD5 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A13Q9NSD5 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A13Q9NSD5 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.61■□□□□ 0.73
SLC6A13Q9NSD5 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.61■□□□□ 0.73
SLC6A13Q9NSD5 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC6A13Q9NSD5 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.61■□□□□ 0.73
SLC6A13Q9NSD5 EEF1DP3-203ENST00000566025 782 ntBASIC19.61■□□□□ 0.73
SLC6A13Q9NSD5 AL136967.2-201ENST00000623968 743 ntBASIC19.61■□□□□ 0.73
SLC6A13Q9NSD5 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC6A13Q9NSD5 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A13Q9NSD5 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A13Q9NSD5 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A13Q9NSD5 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A13Q9NSD5 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.61■□□□□ 0.73
SLC6A13Q9NSD5 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC6A13Q9NSD5 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC6A13Q9NSD5 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.61■□□□□ 0.73
SLC6A13Q9NSD5 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.61■□□□□ 0.73
SLC6A13Q9NSD5 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.6■□□□□ 0.73
SLC6A13Q9NSD5 FP700111.2-201ENST00000619190 1892 ntBASIC19.6■□□□□ 0.73
SLC6A13Q9NSD5 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC6A13Q9NSD5 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC6A13Q9NSD5 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC6A13Q9NSD5 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC6A13Q9NSD5 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SLC6A13Q9NSD5 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC6A13Q9NSD5 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC6A13Q9NSD5 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC6A13Q9NSD5 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.6■□□□□ 0.73
SLC6A13Q9NSD5 AFG3L1P-217ENST00000557444 2447 ntBASIC19.6■□□□□ 0.73
SLC6A13Q9NSD5 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.6■□□□□ 0.73
SLC6A13Q9NSD5 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.6■□□□□ 0.73
SLC6A13Q9NSD5 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC6A13Q9NSD5 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.6■□□□□ 0.73
SLC6A13Q9NSD5 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.6■□□□□ 0.73
SLC6A13Q9NSD5 AL355001.2-201ENST00000620617 1191 ntBASIC19.6■□□□□ 0.73
SLC6A13Q9NSD5 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC6A13Q9NSD5 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC6A13Q9NSD5 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SLC6A13Q9NSD5 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
SLC6A13Q9NSD5 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC6A13Q9NSD5 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.59■□□□□ 0.73
SLC6A13Q9NSD5 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC6A13Q9NSD5 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC6A13Q9NSD5 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC6A13Q9NSD5 AC112907.3-201ENST00000577781 2400 ntBASIC19.59■□□□□ 0.73
SLC6A13Q9NSD5 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC6A13Q9NSD5 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.59■□□□□ 0.73
SLC6A13Q9NSD5 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.59■□□□□ 0.73
SLC6A13Q9NSD5 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.59■□□□□ 0.73
SLC6A13Q9NSD5 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SLC6A13Q9NSD5 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.59■□□□□ 0.73
SLC6A13Q9NSD5 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC6A13Q9NSD5 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.59■□□□□ 0.73
SLC6A13Q9NSD5 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.59■□□□□ 0.73
SLC6A13Q9NSD5 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SLC6A13Q9NSD5 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.59■□□□□ 0.73
SLC6A13Q9NSD5 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.59■□□□□ 0.73
SLC6A13Q9NSD5 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
SLC6A13Q9NSD5 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
SLC6A13Q9NSD5 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
SLC6A13Q9NSD5 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SLC6A13Q9NSD5 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SLC6A13Q9NSD5 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SLC6A13Q9NSD5 AL512408.1-201ENST00000569378 2000 ntBASIC19.58■□□□□ 0.73
SLC6A13Q9NSD5 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLC6A13Q9NSD5 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLC6A13Q9NSD5 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.58■□□□□ 0.72
SLC6A13Q9NSD5 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.58■□□□□ 0.72
SLC6A13Q9NSD5 AC012414.1-201ENST00000556676 535 ntBASIC19.58■□□□□ 0.72
SLC6A13Q9NSD5 TPRG1LP1-201ENST00000598702 760 ntBASIC19.58■□□□□ 0.72
SLC6A13Q9NSD5 AC053503.5-201ENST00000601508 636 ntBASIC19.58■□□□□ 0.72
SLC6A13Q9NSD5 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
SLC6A13Q9NSD5 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLC6A13Q9NSD5 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SLC6A13Q9NSD5 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLC6A13Q9NSD5 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.58■□□□□ 0.72
SLC6A13Q9NSD5 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.58■□□□□ 0.72
SLC6A13Q9NSD5 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLC6A13Q9NSD5 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.58■□□□□ 0.72
SLC6A13Q9NSD5 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLC6A13Q9NSD5 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC6A13Q9NSD5 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC6A13Q9NSD5 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SLC6A13Q9NSD5 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.57■□□□□ 0.72
SLC6A13Q9NSD5 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC6A13Q9NSD5 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC6A13Q9NSD5 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC6A13Q9NSD5 AC091305.1-201ENST00000479476 895 ntBASIC19.57■□□□□ 0.72
SLC6A13Q9NSD5 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.57■□□□□ 0.72
SLC6A13Q9NSD5 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.57■□□□□ 0.72
SLC6A13Q9NSD5 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC6A13Q9NSD5 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SLC6A13Q9NSD5 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SLC6A13Q9NSD5 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms