Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC14.3□□□□□ -0.12
CDC42SE2Q9NRR3 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CDC42SE2Q9NRR3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CDC42SE2Q9NRR3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDC42SE2Q9NRR3 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDC42SE2Q9NRR3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CDC42SE2Q9NRR3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDC42SE2Q9NRR3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDC42SE2Q9NRR3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDC42SE2Q9NRR3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC14.3□□□□□ -0.12
CDC42SE2Q9NRR3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC14.3□□□□□ -0.12
CDC42SE2Q9NRR3 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDC42SE2Q9NRR3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CDC42SE2Q9NRR3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDC42SE2Q9NRR3 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDC42SE2Q9NRR3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDC42SE2Q9NRR3 IGHV3-19-201ENST00000521488 291 ntBASIC14.3□□□□□ -0.12
CDC42SE2Q9NRR3 MIR4767-201ENST00000582827 78 ntBASIC14.3□□□□□ -0.12
CDC42SE2Q9NRR3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC14.3□□□□□ -0.12
CDC42SE2Q9NRR3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDC42SE2Q9NRR3 AC020907.5-201ENST00000624372 1936 ntBASIC14.3□□□□□ -0.12
CDC42SE2Q9NRR3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDC42SE2Q9NRR3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDC42SE2Q9NRR3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
CDC42SE2Q9NRR3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDC42SE2Q9NRR3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDC42SE2Q9NRR3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDC42SE2Q9NRR3 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC42SE2Q9NRR3 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CDC42SE2Q9NRR3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC14.29□□□□□ -0.12
CDC42SE2Q9NRR3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC14.29□□□□□ -0.12
CDC42SE2Q9NRR3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC42SE2Q9NRR3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CDC42SE2Q9NRR3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC42SE2Q9NRR3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC42SE2Q9NRR3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
CDC42SE2Q9NRR3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC14.29□□□□□ -0.12
CDC42SE2Q9NRR3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC42SE2Q9NRR3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC42SE2Q9NRR3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC14.29□□□□□ -0.12
CDC42SE2Q9NRR3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDC42SE2Q9NRR3 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CDC42SE2Q9NRR3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC14.29□□□□□ -0.12
CDC42SE2Q9NRR3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC42SE2Q9NRR3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC42SE2Q9NRR3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC42SE2Q9NRR3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CDC42SE2Q9NRR3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CDC42SE2Q9NRR3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CDC42SE2Q9NRR3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CDC42SE2Q9NRR3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDC42SE2Q9NRR3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC14.29□□□□□ -0.12
CDC42SE2Q9NRR3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC14.29□□□□□ -0.12
CDC42SE2Q9NRR3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDC42SE2Q9NRR3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC42SE2Q9NRR3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC42SE2Q9NRR3 UNC93B3-201ENST00000308076 687 ntBASIC14.28□□□□□ -0.12
CDC42SE2Q9NRR3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CDC42SE2Q9NRR3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC42SE2Q9NRR3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC14.28□□□□□ -0.12
CDC42SE2Q9NRR3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC14.28□□□□□ -0.12
CDC42SE2Q9NRR3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDC42SE2Q9NRR3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CDC42SE2Q9NRR3 AC005224.4-201ENST00000583262 1652 ntBASIC14.28□□□□□ -0.12
CDC42SE2Q9NRR3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC42SE2Q9NRR3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CDC42SE2Q9NRR3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
CDC42SE2Q9NRR3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
CDC42SE2Q9NRR3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDC42SE2Q9NRR3 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.12
CDC42SE2Q9NRR3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CDC42SE2Q9NRR3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDC42SE2Q9NRR3 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC14.27□□□□□ -0.12
CDC42SE2Q9NRR3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CDC42SE2Q9NRR3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC14.27□□□□□ -0.12
CDC42SE2Q9NRR3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDC42SE2Q9NRR3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDC42SE2Q9NRR3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDC42SE2Q9NRR3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC14.27□□□□□ -0.13
CDC42SE2Q9NRR3 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CDC42SE2Q9NRR3 AL136116.3-201ENST00000402907 1138 ntBASIC14.27□□□□□ -0.13
CDC42SE2Q9NRR3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDC42SE2Q9NRR3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC14.27□□□□□ -0.13
CDC42SE2Q9NRR3 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC14.27□□□□□ -0.13
CDC42SE2Q9NRR3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDC42SE2Q9NRR3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC14.27□□□□□ -0.13
CDC42SE2Q9NRR3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDC42SE2Q9NRR3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDC42SE2Q9NRR3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDC42SE2Q9NRR3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDC42SE2Q9NRR3 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDC42SE2Q9NRR3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC14.27□□□□□ -0.13
CDC42SE2Q9NRR3 BID-203ENST00000399765 1879 ntTSL 2 BASIC14.27□□□□□ -0.13
CDC42SE2Q9NRR3 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDC42SE2Q9NRR3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CDC42SE2Q9NRR3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDC42SE2Q9NRR3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42SE2Q9NRR3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42SE2Q9NRR3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDC42SE2Q9NRR3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms