Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
C12orf4Q9NQ89 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
C12orf4Q9NQ89 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
C12orf4Q9NQ89 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
C12orf4Q9NQ89 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
C12orf4Q9NQ89 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
C12orf4Q9NQ89 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
C12orf4Q9NQ89 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
C12orf4Q9NQ89 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
C12orf4Q9NQ89 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
C12orf4Q9NQ89 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.95■□□□□ 0.46
C12orf4Q9NQ89 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
C12orf4Q9NQ89 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.95■□□□□ 0.46
C12orf4Q9NQ89 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.95■□□□□ 0.46
C12orf4Q9NQ89 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
C12orf4Q9NQ89 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
C12orf4Q9NQ89 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
C12orf4Q9NQ89 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
C12orf4Q9NQ89 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
C12orf4Q9NQ89 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
C12orf4Q9NQ89 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
C12orf4Q9NQ89 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
C12orf4Q9NQ89 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.95■□□□□ 0.46
C12orf4Q9NQ89 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
C12orf4Q9NQ89 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
C12orf4Q9NQ89 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
C12orf4Q9NQ89 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
C12orf4Q9NQ89 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
C12orf4Q9NQ89 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.94■□□□□ 0.46
C12orf4Q9NQ89 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
C12orf4Q9NQ89 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.94■□□□□ 0.46
C12orf4Q9NQ89 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
C12orf4Q9NQ89 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
C12orf4Q9NQ89 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
C12orf4Q9NQ89 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
C12orf4Q9NQ89 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
C12orf4Q9NQ89 AL034346.1-201ENST00000568244 1277 ntBASIC17.94■□□□□ 0.46
C12orf4Q9NQ89 MIR3621-201ENST00000580529 85 ntBASIC17.94■□□□□ 0.46
C12orf4Q9NQ89 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
C12orf4Q9NQ89 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
C12orf4Q9NQ89 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
C12orf4Q9NQ89 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.94■□□□□ 0.46
C12orf4Q9NQ89 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
C12orf4Q9NQ89 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
C12orf4Q9NQ89 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
C12orf4Q9NQ89 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
C12orf4Q9NQ89 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.93■□□□□ 0.46
C12orf4Q9NQ89 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
C12orf4Q9NQ89 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
C12orf4Q9NQ89 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
C12orf4Q9NQ89 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
C12orf4Q9NQ89 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
C12orf4Q9NQ89 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
C12orf4Q9NQ89 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
C12orf4Q9NQ89 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
C12orf4Q9NQ89 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC17.93■□□□□ 0.46
C12orf4Q9NQ89 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.93■□□□□ 0.46
C12orf4Q9NQ89 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
C12orf4Q9NQ89 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
C12orf4Q9NQ89 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
C12orf4Q9NQ89 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
C12orf4Q9NQ89 OXCT2P1-201ENST00000447263 1535 ntBASIC17.93■□□□□ 0.46
C12orf4Q9NQ89 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
C12orf4Q9NQ89 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
C12orf4Q9NQ89 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
C12orf4Q9NQ89 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
C12orf4Q9NQ89 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
C12orf4Q9NQ89 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
C12orf4Q9NQ89 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
C12orf4Q9NQ89 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
C12orf4Q9NQ89 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
C12orf4Q9NQ89 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
C12orf4Q9NQ89 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.92■□□□□ 0.46
C12orf4Q9NQ89 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.92■□□□□ 0.46
C12orf4Q9NQ89 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
C12orf4Q9NQ89 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
C12orf4Q9NQ89 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
C12orf4Q9NQ89 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
C12orf4Q9NQ89 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
C12orf4Q9NQ89 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
C12orf4Q9NQ89 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
C12orf4Q9NQ89 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
C12orf4Q9NQ89 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
C12orf4Q9NQ89 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
C12orf4Q9NQ89 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
C12orf4Q9NQ89 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.91■□□□□ 0.46
C12orf4Q9NQ89 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
C12orf4Q9NQ89 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
C12orf4Q9NQ89 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
C12orf4Q9NQ89 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.91■□□□□ 0.46
C12orf4Q9NQ89 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
C12orf4Q9NQ89 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
C12orf4Q9NQ89 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.91■□□□□ 0.46
C12orf4Q9NQ89 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
C12orf4Q9NQ89 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.91■□□□□ 0.46
C12orf4Q9NQ89 AL035685.1-201ENST00000636663 812 ntBASIC17.91■□□□□ 0.46
C12orf4Q9NQ89 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
C12orf4Q9NQ89 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.91■□□□□ 0.46
C12orf4Q9NQ89 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
C12orf4Q9NQ89 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms