Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.41■□□□□ 0.7
VCX3AQ9NNX9 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.41■□□□□ 0.7
VCX3AQ9NNX9 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VCX3AQ9NNX9 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VCX3AQ9NNX9 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.41■□□□□ 0.7
VCX3AQ9NNX9 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VCX3AQ9NNX9 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VCX3AQ9NNX9 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.41■□□□□ 0.7
VCX3AQ9NNX9 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
VCX3AQ9NNX9 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VCX3AQ9NNX9 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
VCX3AQ9NNX9 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VCX3AQ9NNX9 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
VCX3AQ9NNX9 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VCX3AQ9NNX9 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.4■□□□□ 0.7
VCX3AQ9NNX9 AC116562.4-201ENST00000641316 2276 ntBASIC19.4■□□□□ 0.7
VCX3AQ9NNX9 AL049796.1-201ENST00000565336 1766 ntBASIC19.4■□□□□ 0.7
VCX3AQ9NNX9 AC020916.1-201ENST00000587762 1774 ntBASIC19.4■□□□□ 0.7
VCX3AQ9NNX9 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VCX3AQ9NNX9 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
VCX3AQ9NNX9 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.4■□□□□ 0.7
VCX3AQ9NNX9 AC022413.1-201ENST00000624602 984 ntBASIC19.4■□□□□ 0.7
VCX3AQ9NNX9 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VCX3AQ9NNX9 FP325331.1-202ENST00000623531 1380 ntBASIC19.4■□□□□ 0.7
VCX3AQ9NNX9 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.4■□□□□ 0.7
VCX3AQ9NNX9 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
VCX3AQ9NNX9 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VCX3AQ9NNX9 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VCX3AQ9NNX9 LTB4R2-202ENST00000528054 3092 ntBASIC19.4■□□□□ 0.7
VCX3AQ9NNX9 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.4■□□□□ 0.7
VCX3AQ9NNX9 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
VCX3AQ9NNX9 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
VCX3AQ9NNX9 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
VCX3AQ9NNX9 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.39■□□□□ 0.7
VCX3AQ9NNX9 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
VCX3AQ9NNX9 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
VCX3AQ9NNX9 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
VCX3AQ9NNX9 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.39■□□□□ 0.7
VCX3AQ9NNX9 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.39■□□□□ 0.7
VCX3AQ9NNX9 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
VCX3AQ9NNX9 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
VCX3AQ9NNX9 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VCX3AQ9NNX9 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VCX3AQ9NNX9 AC004448.1-201ENST00000458332 883 ntBASIC19.39■□□□□ 0.69
VCX3AQ9NNX9 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.39■□□□□ 0.69
VCX3AQ9NNX9 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VCX3AQ9NNX9 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.39■□□□□ 0.69
VCX3AQ9NNX9 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.39■□□□□ 0.69
VCX3AQ9NNX9 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
VCX3AQ9NNX9 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VCX3AQ9NNX9 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VCX3AQ9NNX9 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
VCX3AQ9NNX9 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VCX3AQ9NNX9 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
VCX3AQ9NNX9 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.39■□□□□ 0.69
VCX3AQ9NNX9 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VCX3AQ9NNX9 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.39■□□□□ 0.69
VCX3AQ9NNX9 NEFHP1-201ENST00000412845 2629 ntBASIC19.38■□□□□ 0.69
VCX3AQ9NNX9 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VCX3AQ9NNX9 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
VCX3AQ9NNX9 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VCX3AQ9NNX9 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VCX3AQ9NNX9 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.38■□□□□ 0.69
VCX3AQ9NNX9 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VCX3AQ9NNX9 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.38■□□□□ 0.69
VCX3AQ9NNX9 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VCX3AQ9NNX9 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
VCX3AQ9NNX9 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.38■□□□□ 0.69
VCX3AQ9NNX9 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
VCX3AQ9NNX9 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
VCX3AQ9NNX9 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VCX3AQ9NNX9 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
VCX3AQ9NNX9 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
VCX3AQ9NNX9 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.37■□□□□ 0.69
VCX3AQ9NNX9 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VCX3AQ9NNX9 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VCX3AQ9NNX9 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VCX3AQ9NNX9 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VCX3AQ9NNX9 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VCX3AQ9NNX9 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VCX3AQ9NNX9 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.37■□□□□ 0.69
VCX3AQ9NNX9 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
VCX3AQ9NNX9 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VCX3AQ9NNX9 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
VCX3AQ9NNX9 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VCX3AQ9NNX9 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
VCX3AQ9NNX9 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
VCX3AQ9NNX9 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VCX3AQ9NNX9 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VCX3AQ9NNX9 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.37■□□□□ 0.69
VCX3AQ9NNX9 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
VCX3AQ9NNX9 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.37■□□□□ 0.69
VCX3AQ9NNX9 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VCX3AQ9NNX9 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
VCX3AQ9NNX9 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VCX3AQ9NNX9 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VCX3AQ9NNX9 C17orf82-201ENST00000623772 1530 ntBASIC19.36■□□□□ 0.69
VCX3AQ9NNX9 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VCX3AQ9NNX9 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
VCX3AQ9NNX9 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms