Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
BRF2Q9HAW0 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
BRF2Q9HAW0 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
BRF2Q9HAW0 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.88■□□□□ 0.77
BRF2Q9HAW0 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.88■□□□□ 0.77
BRF2Q9HAW0 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
BRF2Q9HAW0 KRT18P20-201ENST00000548986 1279 ntBASIC19.88■□□□□ 0.77
BRF2Q9HAW0 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BRF2Q9HAW0 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
BRF2Q9HAW0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
BRF2Q9HAW0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BRF2Q9HAW0 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.88■□□□□ 0.77
BRF2Q9HAW0 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BRF2Q9HAW0 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
BRF2Q9HAW0 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
BRF2Q9HAW0 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.87■□□□□ 0.77
BRF2Q9HAW0 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
BRF2Q9HAW0 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.87■□□□□ 0.77
BRF2Q9HAW0 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
BRF2Q9HAW0 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
BRF2Q9HAW0 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
BRF2Q9HAW0 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
BRF2Q9HAW0 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.87■□□□□ 0.77
BRF2Q9HAW0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.87■□□□□ 0.77
BRF2Q9HAW0 AP001160.3-201ENST00000601484 763 ntBASIC19.87■□□□□ 0.77
BRF2Q9HAW0 RARRES2P11-201ENST00000635158 484 ntBASIC19.87■□□□□ 0.77
BRF2Q9HAW0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
BRF2Q9HAW0 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
BRF2Q9HAW0 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
BRF2Q9HAW0 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.87■□□□□ 0.77
BRF2Q9HAW0 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.86■□□□□ 0.77
BRF2Q9HAW0 FEM1AP1-201ENST00000431297 1995 ntBASIC19.86■□□□□ 0.77
BRF2Q9HAW0 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.86■□□□□ 0.77
BRF2Q9HAW0 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BRF2Q9HAW0 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.86■□□□□ 0.77
BRF2Q9HAW0 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
BRF2Q9HAW0 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.86■□□□□ 0.77
BRF2Q9HAW0 AC245052.3-201ENST00000450182 901 ntBASIC19.86■□□□□ 0.77
BRF2Q9HAW0 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BRF2Q9HAW0 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.86■□□□□ 0.77
BRF2Q9HAW0 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.86■□□□□ 0.77
BRF2Q9HAW0 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.86■□□□□ 0.77
BRF2Q9HAW0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
BRF2Q9HAW0 LINC01521-201ENST00000504184 1943 ntBASIC19.86■□□□□ 0.77
BRF2Q9HAW0 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
BRF2Q9HAW0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BRF2Q9HAW0 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BRF2Q9HAW0 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BRF2Q9HAW0 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BRF2Q9HAW0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
BRF2Q9HAW0 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
BRF2Q9HAW0 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BRF2Q9HAW0 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BRF2Q9HAW0 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
BRF2Q9HAW0 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.85■□□□□ 0.77
BRF2Q9HAW0 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.85■□□□□ 0.77
BRF2Q9HAW0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
BRF2Q9HAW0 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BRF2Q9HAW0 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BRF2Q9HAW0 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BRF2Q9HAW0 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
BRF2Q9HAW0 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
BRF2Q9HAW0 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
BRF2Q9HAW0 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
BRF2Q9HAW0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.84■□□□□ 0.77
BRF2Q9HAW0 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
BRF2Q9HAW0 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
BRF2Q9HAW0 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
BRF2Q9HAW0 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
BRF2Q9HAW0 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BRF2Q9HAW0 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
BRF2Q9HAW0 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.84■□□□□ 0.77
BRF2Q9HAW0 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BRF2Q9HAW0 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.84■□□□□ 0.77
BRF2Q9HAW0 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BRF2Q9HAW0 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.84■□□□□ 0.77
BRF2Q9HAW0 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BRF2Q9HAW0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
BRF2Q9HAW0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.84■□□□□ 0.77
BRF2Q9HAW0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
BRF2Q9HAW0 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
BRF2Q9HAW0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.83■□□□□ 0.77
BRF2Q9HAW0 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.83■□□□□ 0.77
BRF2Q9HAW0 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
BRF2Q9HAW0 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
BRF2Q9HAW0 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
BRF2Q9HAW0 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
BRF2Q9HAW0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
BRF2Q9HAW0 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
BRF2Q9HAW0 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.83■□□□□ 0.77
BRF2Q9HAW0 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
BRF2Q9HAW0 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
BRF2Q9HAW0 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
BRF2Q9HAW0 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
BRF2Q9HAW0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
BRF2Q9HAW0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
BRF2Q9HAW0 AC007225.1-201ENST00000566331 1836 ntBASIC19.83■□□□□ 0.76
BRF2Q9HAW0 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
BRF2Q9HAW0 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
BRF2Q9HAW0 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms