Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.48■□□□□ 0.87
POLR1BQ9H9Y6 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
POLR1BQ9H9Y6 POU5F1P3-201ENST00000428824 1078 ntBASIC20.48■□□□□ 0.87
POLR1BQ9H9Y6 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
POLR1BQ9H9Y6 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
POLR1BQ9H9Y6 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.48■□□□□ 0.87
POLR1BQ9H9Y6 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
POLR1BQ9H9Y6 AC098934.4-201ENST00000564127 592 ntBASIC20.48■□□□□ 0.87
POLR1BQ9H9Y6 AC138907.5-202ENST00000569484 235 ntBASIC20.48■□□□□ 0.87
POLR1BQ9H9Y6 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.48■□□□□ 0.87
POLR1BQ9H9Y6 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
POLR1BQ9H9Y6 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
POLR1BQ9H9Y6 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
POLR1BQ9H9Y6 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
POLR1BQ9H9Y6 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
POLR1BQ9H9Y6 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
POLR1BQ9H9Y6 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.47■□□□□ 0.87
POLR1BQ9H9Y6 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
POLR1BQ9H9Y6 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
POLR1BQ9H9Y6 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.47■□□□□ 0.87
POLR1BQ9H9Y6 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
POLR1BQ9H9Y6 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.47■□□□□ 0.87
POLR1BQ9H9Y6 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
POLR1BQ9H9Y6 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
POLR1BQ9H9Y6 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
POLR1BQ9H9Y6 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.47■□□□□ 0.87
POLR1BQ9H9Y6 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.47■□□□□ 0.87
POLR1BQ9H9Y6 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.47■□□□□ 0.87
POLR1BQ9H9Y6 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.47■□□□□ 0.87
POLR1BQ9H9Y6 AC008687.6-201ENST00000596318 630 ntBASIC20.47■□□□□ 0.87
POLR1BQ9H9Y6 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
POLR1BQ9H9Y6 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
POLR1BQ9H9Y6 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.47■□□□□ 0.87
POLR1BQ9H9Y6 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
POLR1BQ9H9Y6 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
POLR1BQ9H9Y6 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
POLR1BQ9H9Y6 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
POLR1BQ9H9Y6 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
POLR1BQ9H9Y6 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.47■□□□□ 0.87
POLR1BQ9H9Y6 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
POLR1BQ9H9Y6 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.46■□□□□ 0.87
POLR1BQ9H9Y6 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
POLR1BQ9H9Y6 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.46■□□□□ 0.87
POLR1BQ9H9Y6 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.46■□□□□ 0.87
POLR1BQ9H9Y6 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
POLR1BQ9H9Y6 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.46■□□□□ 0.87
POLR1BQ9H9Y6 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
POLR1BQ9H9Y6 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.46■□□□□ 0.87
POLR1BQ9H9Y6 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
POLR1BQ9H9Y6 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
POLR1BQ9H9Y6 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
POLR1BQ9H9Y6 ITM2C-210ENST00000620962 501 ntBASIC20.46■□□□□ 0.87
POLR1BQ9H9Y6 AC013268.1-206ENST00000638368 961 ntBASIC20.46■□□□□ 0.87
POLR1BQ9H9Y6 AC112229.1-201ENST00000639295 961 ntBASIC20.46■□□□□ 0.87
POLR1BQ9H9Y6 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
POLR1BQ9H9Y6 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
POLR1BQ9H9Y6 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
POLR1BQ9H9Y6 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
POLR1BQ9H9Y6 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.46■□□□□ 0.87
POLR1BQ9H9Y6 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
POLR1BQ9H9Y6 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.46■□□□□ 0.87
POLR1BQ9H9Y6 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
POLR1BQ9H9Y6 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
POLR1BQ9H9Y6 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
POLR1BQ9H9Y6 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
POLR1BQ9H9Y6 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.45■□□□□ 0.86
POLR1BQ9H9Y6 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.45■□□□□ 0.86
POLR1BQ9H9Y6 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.45■□□□□ 0.86
POLR1BQ9H9Y6 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.45■□□□□ 0.86
POLR1BQ9H9Y6 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
POLR1BQ9H9Y6 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
POLR1BQ9H9Y6 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR1BQ9H9Y6 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
POLR1BQ9H9Y6 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR1BQ9H9Y6 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR1BQ9H9Y6 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR1BQ9H9Y6 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR1BQ9H9Y6 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.44■□□□□ 0.86
POLR1BQ9H9Y6 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR1BQ9H9Y6 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR1BQ9H9Y6 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR1BQ9H9Y6 KRT18P29-201ENST00000397031 1267 ntBASIC20.44■□□□□ 0.86
POLR1BQ9H9Y6 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.44■□□□□ 0.86
POLR1BQ9H9Y6 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
POLR1BQ9H9Y6 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR1BQ9H9Y6 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR1BQ9H9Y6 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.44■□□□□ 0.86
POLR1BQ9H9Y6 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR1BQ9H9Y6 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR1BQ9H9Y6 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
POLR1BQ9H9Y6 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.44■□□□□ 0.86
POLR1BQ9H9Y6 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
POLR1BQ9H9Y6 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
POLR1BQ9H9Y6 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.43■□□□□ 0.86
POLR1BQ9H9Y6 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.43■□□□□ 0.86
POLR1BQ9H9Y6 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
POLR1BQ9H9Y6 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
POLR1BQ9H9Y6 RNA5SP413-201ENST00000516373 109 ntBASIC20.43■□□□□ 0.86
POLR1BQ9H9Y6 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.43■□□□□ 0.86
POLR1BQ9H9Y6 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms