Protein–RNA interactions for Protein: Q9H3R1

NDST4, Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDST4Q9H3R1 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NDST4Q9H3R1 KRT87P-202ENST00000534226 1464 ntBASIC22.65■■□□□ 1.22
NDST4Q9H3R1 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NDST4Q9H3R1 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NDST4Q9H3R1 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
NDST4Q9H3R1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
NDST4Q9H3R1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
NDST4Q9H3R1 GABARAPL3-202ENST00000624044 1851 ntBASIC22.64■■□□□ 1.22
NDST4Q9H3R1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
NDST4Q9H3R1 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC22.64■■□□□ 1.22
NDST4Q9H3R1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
NDST4Q9H3R1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
NDST4Q9H3R1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.64■■□□□ 1.21
NDST4Q9H3R1 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC22.64■■□□□ 1.21
NDST4Q9H3R1 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC22.64■■□□□ 1.21
NDST4Q9H3R1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
NDST4Q9H3R1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
NDST4Q9H3R1 AC007225.1-201ENST00000566331 1836 ntBASIC22.64■■□□□ 1.21
NDST4Q9H3R1 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
NDST4Q9H3R1 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC22.63■■□□□ 1.21
NDST4Q9H3R1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
NDST4Q9H3R1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC22.63■■□□□ 1.21
NDST4Q9H3R1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC22.63■■□□□ 1.21
NDST4Q9H3R1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NDST4Q9H3R1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC22.63■■□□□ 1.21
NDST4Q9H3R1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NDST4Q9H3R1 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
NDST4Q9H3R1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
NDST4Q9H3R1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC22.63■■□□□ 1.21
NDST4Q9H3R1 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
NDST4Q9H3R1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NDST4Q9H3R1 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
NDST4Q9H3R1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NDST4Q9H3R1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NDST4Q9H3R1 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NDST4Q9H3R1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
NDST4Q9H3R1 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
NDST4Q9H3R1 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NDST4Q9H3R1 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
NDST4Q9H3R1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
NDST4Q9H3R1 AC027612.3-201ENST00000413684 1047 ntBASIC22.62■■□□□ 1.21
NDST4Q9H3R1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
NDST4Q9H3R1 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
NDST4Q9H3R1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
NDST4Q9H3R1 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NDST4Q9H3R1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
NDST4Q9H3R1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC22.62■■□□□ 1.21
NDST4Q9H3R1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
NDST4Q9H3R1 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
NDST4Q9H3R1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
NDST4Q9H3R1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
NDST4Q9H3R1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC22.61■■□□□ 1.21
NDST4Q9H3R1 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC22.61■■□□□ 1.21
NDST4Q9H3R1 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NDST4Q9H3R1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
NDST4Q9H3R1 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
NDST4Q9H3R1 POU5F1P4-201ENST00000413175 1085 ntBASIC22.61■■□□□ 1.21
NDST4Q9H3R1 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NDST4Q9H3R1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
NDST4Q9H3R1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
NDST4Q9H3R1 AC008175.2-201ENST00000612840 297 ntBASIC22.61■■□□□ 1.21
NDST4Q9H3R1 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
NDST4Q9H3R1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NDST4Q9H3R1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NDST4Q9H3R1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NDST4Q9H3R1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
NDST4Q9H3R1 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
NDST4Q9H3R1 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
NDST4Q9H3R1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
NDST4Q9H3R1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC22.6■■□□□ 1.21
NDST4Q9H3R1 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC22.6■■□□□ 1.21
NDST4Q9H3R1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
NDST4Q9H3R1 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.6■■□□□ 1.21
NDST4Q9H3R1 AC011484.1-201ENST00000377652 1995 ntBASIC22.6■■□□□ 1.21
NDST4Q9H3R1 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
NDST4Q9H3R1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
NDST4Q9H3R1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
NDST4Q9H3R1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
NDST4Q9H3R1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.6■■□□□ 1.21
NDST4Q9H3R1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
NDST4Q9H3R1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
NDST4Q9H3R1 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
NDST4Q9H3R1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.6■■□□□ 1.21
NDST4Q9H3R1 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.6■■□□□ 1.21
NDST4Q9H3R1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
NDST4Q9H3R1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
NDST4Q9H3R1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC22.6■■□□□ 1.21
NDST4Q9H3R1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
NDST4Q9H3R1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
NDST4Q9H3R1 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
NDST4Q9H3R1 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.59■■□□□ 1.21
NDST4Q9H3R1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
NDST4Q9H3R1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
NDST4Q9H3R1 AC027702.1-201ENST00000563810 1770 ntBASIC22.59■■□□□ 1.21
NDST4Q9H3R1 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
NDST4Q9H3R1 MIR638-201ENST00000385237 100 ntBASIC22.59■■□□□ 1.21
NDST4Q9H3R1 SERP1-208ENST00000491660 830 ntTSL 2 BASIC22.59■■□□□ 1.21
NDST4Q9H3R1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.59■■□□□ 1.21
NDST4Q9H3R1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC22.59■■□□□ 1.21
NDST4Q9H3R1 AC138907.5-202ENST00000569484 235 ntBASIC22.59■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms