Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.31■□□□□ 0.52
COMMD4Q9H0A8 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
COMMD4Q9H0A8 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
COMMD4Q9H0A8 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COMMD4Q9H0A8 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
COMMD4Q9H0A8 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
COMMD4Q9H0A8 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.3■□□□□ 0.52
COMMD4Q9H0A8 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COMMD4Q9H0A8 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COMMD4Q9H0A8 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.3■□□□□ 0.52
COMMD4Q9H0A8 AC073314.1-201ENST00000568729 2216 ntBASIC18.3■□□□□ 0.52
COMMD4Q9H0A8 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
COMMD4Q9H0A8 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COMMD4Q9H0A8 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COMMD4Q9H0A8 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COMMD4Q9H0A8 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COMMD4Q9H0A8 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.3■□□□□ 0.52
COMMD4Q9H0A8 AC131281.2-201ENST00000520478 145 ntBASIC18.3■□□□□ 0.52
COMMD4Q9H0A8 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.3■□□□□ 0.52
COMMD4Q9H0A8 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.3■□□□□ 0.52
COMMD4Q9H0A8 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
COMMD4Q9H0A8 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COMMD4Q9H0A8 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
COMMD4Q9H0A8 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
COMMD4Q9H0A8 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
COMMD4Q9H0A8 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COMMD4Q9H0A8 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.3■□□□□ 0.52
COMMD4Q9H0A8 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
COMMD4Q9H0A8 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
COMMD4Q9H0A8 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
COMMD4Q9H0A8 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
COMMD4Q9H0A8 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
COMMD4Q9H0A8 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
COMMD4Q9H0A8 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COMMD4Q9H0A8 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.29■□□□□ 0.52
COMMD4Q9H0A8 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
COMMD4Q9H0A8 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
COMMD4Q9H0A8 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
COMMD4Q9H0A8 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
COMMD4Q9H0A8 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COMMD4Q9H0A8 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COMMD4Q9H0A8 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COMMD4Q9H0A8 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COMMD4Q9H0A8 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.29■□□□□ 0.52
COMMD4Q9H0A8 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COMMD4Q9H0A8 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
COMMD4Q9H0A8 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COMMD4Q9H0A8 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.29■□□□□ 0.52
COMMD4Q9H0A8 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
COMMD4Q9H0A8 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
COMMD4Q9H0A8 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
COMMD4Q9H0A8 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.29■□□□□ 0.52
COMMD4Q9H0A8 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
COMMD4Q9H0A8 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COMMD4Q9H0A8 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COMMD4Q9H0A8 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COMMD4Q9H0A8 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COMMD4Q9H0A8 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COMMD4Q9H0A8 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
COMMD4Q9H0A8 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.29■□□□□ 0.52
COMMD4Q9H0A8 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COMMD4Q9H0A8 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COMMD4Q9H0A8 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COMMD4Q9H0A8 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
COMMD4Q9H0A8 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.28■□□□□ 0.52
COMMD4Q9H0A8 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.28■□□□□ 0.52
COMMD4Q9H0A8 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.28■□□□□ 0.52
COMMD4Q9H0A8 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
COMMD4Q9H0A8 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
COMMD4Q9H0A8 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.28■□□□□ 0.52
COMMD4Q9H0A8 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
COMMD4Q9H0A8 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.28■□□□□ 0.52
COMMD4Q9H0A8 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
COMMD4Q9H0A8 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
COMMD4Q9H0A8 AC009237.3-201ENST00000393279 1427 ntBASIC18.28■□□□□ 0.52
COMMD4Q9H0A8 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
COMMD4Q9H0A8 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.28■□□□□ 0.52
COMMD4Q9H0A8 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
COMMD4Q9H0A8 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COMMD4Q9H0A8 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.28■□□□□ 0.52
COMMD4Q9H0A8 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COMMD4Q9H0A8 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.28■□□□□ 0.52
COMMD4Q9H0A8 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COMMD4Q9H0A8 AL121603.2-201ENST00000557373 2117 ntBASIC18.28■□□□□ 0.52
COMMD4Q9H0A8 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.27■□□□□ 0.52
COMMD4Q9H0A8 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.27■□□□□ 0.52
COMMD4Q9H0A8 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.27■□□□□ 0.52
COMMD4Q9H0A8 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
COMMD4Q9H0A8 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.27■□□□□ 0.52
COMMD4Q9H0A8 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COMMD4Q9H0A8 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COMMD4Q9H0A8 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COMMD4Q9H0A8 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COMMD4Q9H0A8 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.27■□□□□ 0.52
COMMD4Q9H0A8 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.27■□□□□ 0.52
COMMD4Q9H0A8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.27■□□□□ 0.52
COMMD4Q9H0A8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COMMD4Q9H0A8 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.27■□□□□ 0.52
COMMD4Q9H0A8 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
COMMD4Q9H0A8 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms