Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
AMBRA1Q9C0C7 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AMBRA1Q9C0C7 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AMBRA1Q9C0C7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AMBRA1Q9C0C7 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AMBRA1Q9C0C7 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AMBRA1Q9C0C7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AMBRA1Q9C0C7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.42■□□□□ 0.7
AMBRA1Q9C0C7 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.42■□□□□ 0.7
AMBRA1Q9C0C7 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AMBRA1Q9C0C7 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
AMBRA1Q9C0C7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
AMBRA1Q9C0C7 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.42■□□□□ 0.7
AMBRA1Q9C0C7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.42■□□□□ 0.7
AMBRA1Q9C0C7 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
AMBRA1Q9C0C7 PLK5-205ENST00000642079 1969 ntBASIC19.42■□□□□ 0.7
AMBRA1Q9C0C7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
AMBRA1Q9C0C7 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AMBRA1Q9C0C7 RASA4CP-201ENST00000424092 1398 ntBASIC19.42■□□□□ 0.7
AMBRA1Q9C0C7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AMBRA1Q9C0C7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AMBRA1Q9C0C7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AMBRA1Q9C0C7 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
AMBRA1Q9C0C7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
AMBRA1Q9C0C7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
AMBRA1Q9C0C7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.41■□□□□ 0.7
AMBRA1Q9C0C7 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
AMBRA1Q9C0C7 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
AMBRA1Q9C0C7 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.41■□□□□ 0.7
AMBRA1Q9C0C7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
AMBRA1Q9C0C7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
AMBRA1Q9C0C7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.41■□□□□ 0.7
AMBRA1Q9C0C7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
AMBRA1Q9C0C7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
AMBRA1Q9C0C7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
AMBRA1Q9C0C7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
AMBRA1Q9C0C7 AC233992.3-201ENST00000607491 485 ntBASIC19.41■□□□□ 0.7
AMBRA1Q9C0C7 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.41■□□□□ 0.7
AMBRA1Q9C0C7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
AMBRA1Q9C0C7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
AMBRA1Q9C0C7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
AMBRA1Q9C0C7 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
AMBRA1Q9C0C7 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
AMBRA1Q9C0C7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.41■□□□□ 0.7
AMBRA1Q9C0C7 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.4■□□□□ 0.7
AMBRA1Q9C0C7 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
AMBRA1Q9C0C7 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.4■□□□□ 0.7
AMBRA1Q9C0C7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.4■□□□□ 0.7
AMBRA1Q9C0C7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.4■□□□□ 0.7
AMBRA1Q9C0C7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.4■□□□□ 0.7
AMBRA1Q9C0C7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.4■□□□□ 0.7
AMBRA1Q9C0C7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.4■□□□□ 0.7
AMBRA1Q9C0C7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AMBRA1Q9C0C7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AMBRA1Q9C0C7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
AMBRA1Q9C0C7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
AMBRA1Q9C0C7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.4■□□□□ 0.7
AMBRA1Q9C0C7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
AMBRA1Q9C0C7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
AMBRA1Q9C0C7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.4■□□□□ 0.7
AMBRA1Q9C0C7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.39■□□□□ 0.7
AMBRA1Q9C0C7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.7
AMBRA1Q9C0C7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
AMBRA1Q9C0C7 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
AMBRA1Q9C0C7 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
AMBRA1Q9C0C7 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
AMBRA1Q9C0C7 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
AMBRA1Q9C0C7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.39■□□□□ 0.69
AMBRA1Q9C0C7 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
AMBRA1Q9C0C7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
AMBRA1Q9C0C7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
AMBRA1Q9C0C7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.39■□□□□ 0.69
AMBRA1Q9C0C7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
AMBRA1Q9C0C7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
AMBRA1Q9C0C7 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.39■□□□□ 0.69
AMBRA1Q9C0C7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
AMBRA1Q9C0C7 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
AMBRA1Q9C0C7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
AMBRA1Q9C0C7 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
AMBRA1Q9C0C7 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
AMBRA1Q9C0C7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
AMBRA1Q9C0C7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
AMBRA1Q9C0C7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
AMBRA1Q9C0C7 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
AMBRA1Q9C0C7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
AMBRA1Q9C0C7 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
AMBRA1Q9C0C7 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
AMBRA1Q9C0C7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
AMBRA1Q9C0C7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
AMBRA1Q9C0C7 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
AMBRA1Q9C0C7 AC099791.1-201ENST00000416440 715 ntBASIC19.38■□□□□ 0.69
AMBRA1Q9C0C7 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.38■□□□□ 0.69
AMBRA1Q9C0C7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
AMBRA1Q9C0C7 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.38■□□□□ 0.69
AMBRA1Q9C0C7 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.38■□□□□ 0.69
AMBRA1Q9C0C7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.38■□□□□ 0.69
AMBRA1Q9C0C7 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
AMBRA1Q9C0C7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
AMBRA1Q9C0C7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
AMBRA1Q9C0C7 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms