Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
NDC1Q9BTX1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.85■□□□□ 0.77
NDC1Q9BTX1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.85■□□□□ 0.77
NDC1Q9BTX1 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.85■□□□□ 0.77
NDC1Q9BTX1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NDC1Q9BTX1 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.85■□□□□ 0.77
NDC1Q9BTX1 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.85■□□□□ 0.77
NDC1Q9BTX1 AC105036.2-201ENST00000569468 176 ntBASIC19.85■□□□□ 0.77
NDC1Q9BTX1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
NDC1Q9BTX1 AL591742.1-201ENST00000604433 565 ntBASIC19.85■□□□□ 0.77
NDC1Q9BTX1 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.85■□□□□ 0.77
NDC1Q9BTX1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NDC1Q9BTX1 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.85■□□□□ 0.77
NDC1Q9BTX1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NDC1Q9BTX1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NDC1Q9BTX1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NDC1Q9BTX1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NDC1Q9BTX1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NDC1Q9BTX1 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NDC1Q9BTX1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
NDC1Q9BTX1 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
NDC1Q9BTX1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NDC1Q9BTX1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NDC1Q9BTX1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
NDC1Q9BTX1 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.84■□□□□ 0.77
NDC1Q9BTX1 TSPY6P-201ENST00000448518 926 ntBASIC19.84■□□□□ 0.77
NDC1Q9BTX1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.84■□□□□ 0.77
NDC1Q9BTX1 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.84■□□□□ 0.77
NDC1Q9BTX1 OR10C1-204ENST00000622521 1039 ntBASIC19.84■□□□□ 0.77
NDC1Q9BTX1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.84■□□□□ 0.77
NDC1Q9BTX1 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.84■□□□□ 0.77
NDC1Q9BTX1 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.84■□□□□ 0.77
NDC1Q9BTX1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NDC1Q9BTX1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NDC1Q9BTX1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NDC1Q9BTX1 AC007375.3-201ENST00000600936 2314 ntBASIC19.84■□□□□ 0.77
NDC1Q9BTX1 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NDC1Q9BTX1 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
NDC1Q9BTX1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NDC1Q9BTX1 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
NDC1Q9BTX1 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NDC1Q9BTX1 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NDC1Q9BTX1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NDC1Q9BTX1 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
NDC1Q9BTX1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.83■□□□□ 0.77
NDC1Q9BTX1 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.83■□□□□ 0.77
NDC1Q9BTX1 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.83■□□□□ 0.77
NDC1Q9BTX1 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.83■□□□□ 0.77
NDC1Q9BTX1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
NDC1Q9BTX1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.83■□□□□ 0.76
NDC1Q9BTX1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
NDC1Q9BTX1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NDC1Q9BTX1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NDC1Q9BTX1 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
NDC1Q9BTX1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
NDC1Q9BTX1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NDC1Q9BTX1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.82■□□□□ 0.76
NDC1Q9BTX1 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NDC1Q9BTX1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
NDC1Q9BTX1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NDC1Q9BTX1 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NDC1Q9BTX1 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.82■□□□□ 0.76
NDC1Q9BTX1 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.82■□□□□ 0.76
NDC1Q9BTX1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.82■□□□□ 0.76
NDC1Q9BTX1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
NDC1Q9BTX1 AL162412.1-201ENST00000567129 965 ntBASIC19.82■□□□□ 0.76
NDC1Q9BTX1 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.82■□□□□ 0.76
NDC1Q9BTX1 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
NDC1Q9BTX1 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NDC1Q9BTX1 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
NDC1Q9BTX1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.82■□□□□ 0.76
NDC1Q9BTX1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NDC1Q9BTX1 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
NDC1Q9BTX1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NDC1Q9BTX1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
NDC1Q9BTX1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.81■□□□□ 0.76
NDC1Q9BTX1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.81■□□□□ 0.76
NDC1Q9BTX1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NDC1Q9BTX1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NDC1Q9BTX1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
NDC1Q9BTX1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.81■□□□□ 0.76
NDC1Q9BTX1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NDC1Q9BTX1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NDC1Q9BTX1 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
NDC1Q9BTX1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.81■□□□□ 0.76
NDC1Q9BTX1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.81■□□□□ 0.76
NDC1Q9BTX1 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NDC1Q9BTX1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
NDC1Q9BTX1 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NDC1Q9BTX1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.8■□□□□ 0.76
NDC1Q9BTX1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.8■□□□□ 0.76
NDC1Q9BTX1 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.8■□□□□ 0.76
NDC1Q9BTX1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NDC1Q9BTX1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
NDC1Q9BTX1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.8■□□□□ 0.76
NDC1Q9BTX1 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.8■□□□□ 0.76
NDC1Q9BTX1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NDC1Q9BTX1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NDC1Q9BTX1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.8■□□□□ 0.76
NDC1Q9BTX1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms