Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK3BQ9BT76 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC14.43□□□□□ -0.1
UPK3BQ9BT76 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK3BQ9BT76 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC14.42□□□□□ -0.1
UPK3BQ9BT76 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC14.42□□□□□ -0.1
UPK3BQ9BT76 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UPK3BQ9BT76 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UPK3BQ9BT76 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UPK3BQ9BT76 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC14.42□□□□□ -0.1
UPK3BQ9BT76 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
UPK3BQ9BT76 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC14.42□□□□□ -0.1
UPK3BQ9BT76 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC14.42□□□□□ -0.1
UPK3BQ9BT76 AC007322.4-201ENST00000509611 723 ntBASIC14.42□□□□□ -0.1
UPK3BQ9BT76 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC14.42□□□□□ -0.1
UPK3BQ9BT76 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UPK3BQ9BT76 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC14.42□□□□□ -0.1
UPK3BQ9BT76 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
UPK3BQ9BT76 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC14.42□□□□□ -0.1
UPK3BQ9BT76 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
UPK3BQ9BT76 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC14.42□□□□□ -0.1
UPK3BQ9BT76 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UPK3BQ9BT76 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC14.42□□□□□ -0.1
UPK3BQ9BT76 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
UPK3BQ9BT76 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UPK3BQ9BT76 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UPK3BQ9BT76 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC14.42□□□□□ -0.1
UPK3BQ9BT76 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC14.42□□□□□ -0.1
UPK3BQ9BT76 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
UPK3BQ9BT76 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
UPK3BQ9BT76 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
UPK3BQ9BT76 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UPK3BQ9BT76 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UPK3BQ9BT76 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK3BQ9BT76 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
UPK3BQ9BT76 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UPK3BQ9BT76 EP400NL-214ENST00000641289 2402 ntBASIC14.41□□□□□ -0.1
UPK3BQ9BT76 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK3BQ9BT76 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK3BQ9BT76 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC14.41□□□□□ -0.1
UPK3BQ9BT76 CROCCP5-201ENST00000436658 830 ntBASIC14.41□□□□□ -0.1
UPK3BQ9BT76 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC14.41□□□□□ -0.1
UPK3BQ9BT76 TERF1P5-201ENST00000477545 1207 ntBASIC14.41□□□□□ -0.1
UPK3BQ9BT76 PPP1R14BP3-201ENST00000509033 445 ntBASIC14.41□□□□□ -0.1
UPK3BQ9BT76 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC14.41□□□□□ -0.1
UPK3BQ9BT76 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC14.41□□□□□ -0.1
UPK3BQ9BT76 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC14.41□□□□□ -0.1
UPK3BQ9BT76 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
UPK3BQ9BT76 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC14.41□□□□□ -0.1
UPK3BQ9BT76 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC14.41□□□□□ -0.1
UPK3BQ9BT76 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK3BQ9BT76 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
UPK3BQ9BT76 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UPK3BQ9BT76 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK3BQ9BT76 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK3BQ9BT76 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK3BQ9BT76 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UPK3BQ9BT76 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UPK3BQ9BT76 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UPK3BQ9BT76 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK3BQ9BT76 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UPK3BQ9BT76 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK3BQ9BT76 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK3BQ9BT76 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK3BQ9BT76 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK3BQ9BT76 FAM99A-202ENST00000538190 1989 ntBASIC14.4□□□□□ -0.1
UPK3BQ9BT76 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK3BQ9BT76 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC14.4□□□□□ -0.1
UPK3BQ9BT76 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK3BQ9BT76 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK3BQ9BT76 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
UPK3BQ9BT76 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK3BQ9BT76 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UPK3BQ9BT76 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK3BQ9BT76 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UPK3BQ9BT76 MIR663A-201ENST00000385250 93 ntBASIC14.4□□□□□ -0.1
UPK3BQ9BT76 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UPK3BQ9BT76 SLC7A5P2-201ENST00000553010 536 ntBASIC14.4□□□□□ -0.1
UPK3BQ9BT76 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC14.4□□□□□ -0.1
UPK3BQ9BT76 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC14.4□□□□□ -0.1
UPK3BQ9BT76 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC14.4□□□□□ -0.1
UPK3BQ9BT76 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
UPK3BQ9BT76 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UPK3BQ9BT76 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.11
UPK3BQ9BT76 AC007375.3-201ENST00000600936 2314 ntBASIC14.4□□□□□ -0.11
UPK3BQ9BT76 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC14.39□□□□□ -0.11
UPK3BQ9BT76 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UPK3BQ9BT76 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
UPK3BQ9BT76 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UPK3BQ9BT76 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC14.39□□□□□ -0.11
UPK3BQ9BT76 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UPK3BQ9BT76 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UPK3BQ9BT76 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
UPK3BQ9BT76 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC14.39□□□□□ -0.11
UPK3BQ9BT76 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UPK3BQ9BT76 NCF1B-203ENST00000435988 1254 ntBASIC14.39□□□□□ -0.11
UPK3BQ9BT76 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC14.39□□□□□ -0.11
UPK3BQ9BT76 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UPK3BQ9BT76 AC005181.1-201ENST00000604782 1256 ntBASIC14.39□□□□□ -0.11
UPK3BQ9BT76 AC243732.1-201ENST00000612648 864 ntBASIC14.39□□□□□ -0.11
UPK3BQ9BT76 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms