Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.78■□□□□ 0.92
CPNE1Q99829 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CPNE1Q99829 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPNE1Q99829 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPNE1Q99829 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.78■□□□□ 0.92
CPNE1Q99829 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPNE1Q99829 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPNE1Q99829 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CPNE1Q99829 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.78■□□□□ 0.92
CPNE1Q99829 AL136967.2-201ENST00000623968 743 ntBASIC20.78■□□□□ 0.92
CPNE1Q99829 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPNE1Q99829 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPNE1Q99829 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.78■□□□□ 0.92
CPNE1Q99829 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.78■□□□□ 0.92
CPNE1Q99829 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CPNE1Q99829 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
CPNE1Q99829 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
CPNE1Q99829 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPNE1Q99829 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPNE1Q99829 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CPNE1Q99829 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPNE1Q99829 AP004607.4-201ENST00000530158 1459 ntBASIC20.77■□□□□ 0.92
CPNE1Q99829 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CPNE1Q99829 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPNE1Q99829 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPNE1Q99829 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.77■□□□□ 0.92
CPNE1Q99829 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.77■□□□□ 0.92
CPNE1Q99829 AL031432.3-201ENST00000607698 485 ntBASIC20.77■□□□□ 0.92
CPNE1Q99829 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.77■□□□□ 0.92
CPNE1Q99829 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPNE1Q99829 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPNE1Q99829 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPNE1Q99829 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CPNE1Q99829 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.77■□□□□ 0.91
CPNE1Q99829 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CPNE1Q99829 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CPNE1Q99829 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPNE1Q99829 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPNE1Q99829 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CPNE1Q99829 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.76■□□□□ 0.91
CPNE1Q99829 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CPNE1Q99829 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CPNE1Q99829 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.76■□□□□ 0.91
CPNE1Q99829 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPNE1Q99829 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CPNE1Q99829 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPNE1Q99829 TPRG1LP1-201ENST00000598702 760 ntBASIC20.76■□□□□ 0.91
CPNE1Q99829 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPNE1Q99829 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.76■□□□□ 0.91
CPNE1Q99829 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.76■□□□□ 0.91
CPNE1Q99829 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPNE1Q99829 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CPNE1Q99829 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.76■□□□□ 0.91
CPNE1Q99829 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPNE1Q99829 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.76■□□□□ 0.91
CPNE1Q99829 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPNE1Q99829 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
CPNE1Q99829 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CPNE1Q99829 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.75■□□□□ 0.91
CPNE1Q99829 AC027702.1-201ENST00000563810 1770 ntBASIC20.75■□□□□ 0.91
CPNE1Q99829 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CPNE1Q99829 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CPNE1Q99829 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPNE1Q99829 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.75■□□□□ 0.91
CPNE1Q99829 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.75■□□□□ 0.91
CPNE1Q99829 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.75■□□□□ 0.91
CPNE1Q99829 AL354811.1-201ENST00000610286 706 ntBASIC20.75■□□□□ 0.91
CPNE1Q99829 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPNE1Q99829 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPNE1Q99829 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE1Q99829 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE1Q99829 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.74■□□□□ 0.91
CPNE1Q99829 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE1Q99829 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE1Q99829 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE1Q99829 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE1Q99829 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
CPNE1Q99829 AC061975.6-201ENST00000579045 1553 ntBASIC20.74■□□□□ 0.91
CPNE1Q99829 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.74■□□□□ 0.91
CPNE1Q99829 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE1Q99829 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE1Q99829 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE1Q99829 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.74■□□□□ 0.91
CPNE1Q99829 AC011484.1-201ENST00000377652 1995 ntBASIC20.74■□□□□ 0.91
CPNE1Q99829 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CPNE1Q99829 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CPNE1Q99829 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPNE1Q99829 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.73■□□□□ 0.91
CPNE1Q99829 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPNE1Q99829 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CPNE1Q99829 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
CPNE1Q99829 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.73■□□□□ 0.91
CPNE1Q99829 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.73■□□□□ 0.91
CPNE1Q99829 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPNE1Q99829 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CPNE1Q99829 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.73■□□□□ 0.91
CPNE1Q99829 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.73■□□□□ 0.91
CPNE1Q99829 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CPNE1Q99829 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPNE1Q99829 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms