Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
S1PR3Q99500 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
S1PR3Q99500 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.11■□□□□ 0.33
S1PR3Q99500 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
S1PR3Q99500 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
S1PR3Q99500 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
S1PR3Q99500 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
S1PR3Q99500 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
S1PR3Q99500 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
S1PR3Q99500 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.11■□□□□ 0.33
S1PR3Q99500 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
S1PR3Q99500 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.1■□□□□ 0.33
S1PR3Q99500 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.1■□□□□ 0.33
S1PR3Q99500 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.1■□□□□ 0.33
S1PR3Q99500 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
S1PR3Q99500 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.1■□□□□ 0.33
S1PR3Q99500 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
S1PR3Q99500 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.1■□□□□ 0.33
S1PR3Q99500 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.1■□□□□ 0.33
S1PR3Q99500 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
S1PR3Q99500 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.1■□□□□ 0.33
S1PR3Q99500 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
S1PR3Q99500 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
S1PR3Q99500 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
S1PR3Q99500 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.1■□□□□ 0.33
S1PR3Q99500 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.1■□□□□ 0.33
S1PR3Q99500 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.1■□□□□ 0.33
S1PR3Q99500 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
S1PR3Q99500 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
S1PR3Q99500 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
S1PR3Q99500 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
S1PR3Q99500 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.1■□□□□ 0.33
S1PR3Q99500 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.09■□□□□ 0.33
S1PR3Q99500 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
S1PR3Q99500 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
S1PR3Q99500 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
S1PR3Q99500 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.09■□□□□ 0.33
S1PR3Q99500 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
S1PR3Q99500 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
S1PR3Q99500 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
S1PR3Q99500 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
S1PR3Q99500 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.09■□□□□ 0.33
S1PR3Q99500 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.09■□□□□ 0.33
S1PR3Q99500 TPRG1LP1-201ENST00000598702 760 ntBASIC17.09■□□□□ 0.33
S1PR3Q99500 AC053503.5-201ENST00000601508 636 ntBASIC17.09■□□□□ 0.33
S1PR3Q99500 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.09■□□□□ 0.33
S1PR3Q99500 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
S1PR3Q99500 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
S1PR3Q99500 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
S1PR3Q99500 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
S1PR3Q99500 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
S1PR3Q99500 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
S1PR3Q99500 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
S1PR3Q99500 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
S1PR3Q99500 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.09■□□□□ 0.33
S1PR3Q99500 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
S1PR3Q99500 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.33
S1PR3Q99500 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
S1PR3Q99500 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
S1PR3Q99500 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
S1PR3Q99500 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
S1PR3Q99500 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.08■□□□□ 0.33
S1PR3Q99500 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
S1PR3Q99500 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
S1PR3Q99500 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
S1PR3Q99500 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
S1PR3Q99500 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
S1PR3Q99500 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
S1PR3Q99500 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
S1PR3Q99500 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.08■□□□□ 0.32
S1PR3Q99500 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.08■□□□□ 0.32
S1PR3Q99500 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
S1PR3Q99500 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
S1PR3Q99500 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
S1PR3Q99500 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
S1PR3Q99500 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.08■□□□□ 0.32
S1PR3Q99500 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
S1PR3Q99500 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.08■□□□□ 0.32
S1PR3Q99500 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
S1PR3Q99500 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
S1PR3Q99500 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
S1PR3Q99500 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
S1PR3Q99500 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
S1PR3Q99500 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
S1PR3Q99500 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
S1PR3Q99500 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
S1PR3Q99500 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
S1PR3Q99500 AC079140.4-201ENST00000507448 529 ntBASIC17.07■□□□□ 0.32
S1PR3Q99500 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
S1PR3Q99500 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
S1PR3Q99500 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
S1PR3Q99500 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
S1PR3Q99500 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.06■□□□□ 0.32
S1PR3Q99500 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
S1PR3Q99500 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
S1PR3Q99500 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.06■□□□□ 0.32
S1PR3Q99500 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
S1PR3Q99500 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
S1PR3Q99500 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
S1PR3Q99500 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms