Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 MIR5787-201ENST00000611784 55 ntBASIC19.59■□□□□ 0.73
COL21A1Q96P44 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.59■□□□□ 0.73
COL21A1Q96P44 DUX4L6-201ENST00000626483 1275 ntBASIC19.59■□□□□ 0.73
COL21A1Q96P44 DUX4L1-201ENST00000627662 1275 ntBASIC19.59■□□□□ 0.73
COL21A1Q96P44 DUX4L8-201ENST00000629013 1275 ntBASIC19.59■□□□□ 0.73
COL21A1Q96P44 DUX4L3-201ENST00000630187 1275 ntBASIC19.59■□□□□ 0.73
COL21A1Q96P44 DUX4L7-201ENST00000630678 1275 ntBASIC19.59■□□□□ 0.73
COL21A1Q96P44 DUX4L5-201ENST00000630834 1275 ntBASIC19.59■□□□□ 0.73
COL21A1Q96P44 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL21A1Q96P44 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.59■□□□□ 0.73
COL21A1Q96P44 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.59■□□□□ 0.73
COL21A1Q96P44 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL21A1Q96P44 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL21A1Q96P44 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL21A1Q96P44 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL21A1Q96P44 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
COL21A1Q96P44 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.58■□□□□ 0.73
COL21A1Q96P44 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.58■□□□□ 0.73
COL21A1Q96P44 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.58■□□□□ 0.73
COL21A1Q96P44 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL21A1Q96P44 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.58■□□□□ 0.72
COL21A1Q96P44 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.58■□□□□ 0.72
COL21A1Q96P44 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.58■□□□□ 0.72
COL21A1Q96P44 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.58■□□□□ 0.72
COL21A1Q96P44 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
COL21A1Q96P44 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
COL21A1Q96P44 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL21A1Q96P44 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.58■□□□□ 0.72
COL21A1Q96P44 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
COL21A1Q96P44 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
COL21A1Q96P44 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL21A1Q96P44 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL21A1Q96P44 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.57■□□□□ 0.72
COL21A1Q96P44 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
COL21A1Q96P44 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL21A1Q96P44 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL21A1Q96P44 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL21A1Q96P44 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL21A1Q96P44 KRT87P-202ENST00000534226 1464 ntBASIC19.57■□□□□ 0.72
COL21A1Q96P44 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.57■□□□□ 0.72
COL21A1Q96P44 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL21A1Q96P44 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL21A1Q96P44 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.57■□□□□ 0.72
COL21A1Q96P44 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL21A1Q96P44 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL21A1Q96P44 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL21A1Q96P44 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.57■□□□□ 0.72
COL21A1Q96P44 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.57■□□□□ 0.72
COL21A1Q96P44 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL21A1Q96P44 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL21A1Q96P44 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL21A1Q96P44 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.57■□□□□ 0.72
COL21A1Q96P44 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.56■□□□□ 0.72
COL21A1Q96P44 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL21A1Q96P44 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL21A1Q96P44 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
COL21A1Q96P44 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL21A1Q96P44 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL21A1Q96P44 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
COL21A1Q96P44 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.56■□□□□ 0.72
COL21A1Q96P44 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.56■□□□□ 0.72
COL21A1Q96P44 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
COL21A1Q96P44 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL21A1Q96P44 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL21A1Q96P44 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL21A1Q96P44 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL21A1Q96P44 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL21A1Q96P44 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.55■□□□□ 0.72
COL21A1Q96P44 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL21A1Q96P44 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.55■□□□□ 0.72
COL21A1Q96P44 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
COL21A1Q96P44 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
COL21A1Q96P44 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.55■□□□□ 0.72
COL21A1Q96P44 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL21A1Q96P44 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL21A1Q96P44 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.55■□□□□ 0.72
COL21A1Q96P44 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL21A1Q96P44 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.55■□□□□ 0.72
COL21A1Q96P44 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.55■□□□□ 0.72
COL21A1Q96P44 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
COL21A1Q96P44 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.55■□□□□ 0.72
COL21A1Q96P44 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL21A1Q96P44 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL21A1Q96P44 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL21A1Q96P44 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
COL21A1Q96P44 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL21A1Q96P44 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL21A1Q96P44 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL21A1Q96P44 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL21A1Q96P44 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL21A1Q96P44 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL21A1Q96P44 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL21A1Q96P44 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL21A1Q96P44 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.54■□□□□ 0.72
COL21A1Q96P44 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.54■□□□□ 0.72
COL21A1Q96P44 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL21A1Q96P44 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.54■□□□□ 0.72
COL21A1Q96P44 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.54■□□□□ 0.72
COL21A1Q96P44 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL21A1Q96P44 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms