Protein–RNA interactions for Protein: Q96NT0

CCDC115, Coiled-coil domain-containing protein 115, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115Q96NT0 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC115Q96NT0 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC115Q96NT0 AL355001.2-201ENST00000620617 1191 ntBASIC19.75■□□□□ 0.75
CCDC115Q96NT0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC115Q96NT0 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC115Q96NT0 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC115Q96NT0 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC115Q96NT0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC115Q96NT0 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC115Q96NT0 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CCDC115Q96NT0 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC115Q96NT0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC115Q96NT0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.74■□□□□ 0.75
CCDC115Q96NT0 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC115Q96NT0 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC115Q96NT0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC115Q96NT0 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.74■□□□□ 0.75
CCDC115Q96NT0 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CCDC115Q96NT0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC115Q96NT0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CCDC115Q96NT0 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC115Q96NT0 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
CCDC115Q96NT0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC115Q96NT0 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.73■□□□□ 0.75
CCDC115Q96NT0 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC115Q96NT0 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC115Q96NT0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CCDC115Q96NT0 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC115Q96NT0 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC115Q96NT0 AF213884.3-201ENST00000563833 479 ntBASIC19.73■□□□□ 0.75
CCDC115Q96NT0 AC110285.6-201ENST00000617652 491 ntBASIC19.73■□□□□ 0.75
CCDC115Q96NT0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC115Q96NT0 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC115Q96NT0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CCDC115Q96NT0 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC115Q96NT0 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC115Q96NT0 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC115Q96NT0 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC115Q96NT0 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CCDC115Q96NT0 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC115Q96NT0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC115Q96NT0 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC115Q96NT0 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC115Q96NT0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC115Q96NT0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC115Q96NT0 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC115Q96NT0 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC115Q96NT0 AC091305.1-201ENST00000479476 895 ntBASIC19.72■□□□□ 0.75
CCDC115Q96NT0 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC115Q96NT0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC115Q96NT0 AC121338.2-201ENST00000622535 1744 ntBASIC19.72■□□□□ 0.75
CCDC115Q96NT0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC115Q96NT0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC115Q96NT0 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC115Q96NT0 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC115Q96NT0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC115Q96NT0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CCDC115Q96NT0 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC115Q96NT0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC115Q96NT0 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CCDC115Q96NT0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CCDC115Q96NT0 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC115Q96NT0 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CCDC115Q96NT0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC115Q96NT0 AL031432.3-201ENST00000607698 485 ntBASIC19.71■□□□□ 0.75
CCDC115Q96NT0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC115Q96NT0 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC115Q96NT0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
CCDC115Q96NT0 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC115Q96NT0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
CCDC115Q96NT0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC115Q96NT0 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC115Q96NT0 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC115Q96NT0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC115Q96NT0 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC115Q96NT0 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC115Q96NT0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC115Q96NT0 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC115Q96NT0 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC115Q96NT0 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC115Q96NT0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC115Q96NT0 AC012414.1-201ENST00000556676 535 ntBASIC19.7■□□□□ 0.74
CCDC115Q96NT0 EEF1DP3-203ENST00000566025 782 ntBASIC19.7■□□□□ 0.74
CCDC115Q96NT0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC115Q96NT0 AL136967.2-201ENST00000623968 743 ntBASIC19.7■□□□□ 0.74
CCDC115Q96NT0 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC115Q96NT0 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC115Q96NT0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC115Q96NT0 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC115Q96NT0 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC115Q96NT0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC115Q96NT0 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC115Q96NT0 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC115Q96NT0 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC115Q96NT0 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CCDC115Q96NT0 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC115Q96NT0 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC115Q96NT0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC115Q96NT0 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.69■□□□□ 0.74
CCDC115Q96NT0 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms