Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.96■■□□□ 1.11
CALR3Q96L12 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CALR3Q96L12 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CALR3Q96L12 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.96■■□□□ 1.11
CALR3Q96L12 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CALR3Q96L12 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CALR3Q96L12 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CALR3Q96L12 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CALR3Q96L12 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
CALR3Q96L12 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.96■■□□□ 1.11
CALR3Q96L12 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CALR3Q96L12 AC073314.1-201ENST00000568729 2216 ntBASIC21.96■■□□□ 1.11
CALR3Q96L12 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.96■■□□□ 1.11
CALR3Q96L12 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CALR3Q96L12 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CALR3Q96L12 AP004607.4-201ENST00000530158 1459 ntBASIC21.96■■□□□ 1.11
CALR3Q96L12 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CALR3Q96L12 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
CALR3Q96L12 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.95■■□□□ 1.1
CALR3Q96L12 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.95■■□□□ 1.1
CALR3Q96L12 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.95■■□□□ 1.1
CALR3Q96L12 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.95■■□□□ 1.1
CALR3Q96L12 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
CALR3Q96L12 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.95■■□□□ 1.1
CALR3Q96L12 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.95■■□□□ 1.1
CALR3Q96L12 AC106739.1-201ENST00000617035 715 ntBASIC21.95■■□□□ 1.1
CALR3Q96L12 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CALR3Q96L12 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.95■■□□□ 1.1
CALR3Q96L12 RASA4CP-201ENST00000424092 1398 ntBASIC21.95■■□□□ 1.1
CALR3Q96L12 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CALR3Q96L12 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CALR3Q96L12 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CALR3Q96L12 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.95■■□□□ 1.1
CALR3Q96L12 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CALR3Q96L12 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.95■■□□□ 1.1
CALR3Q96L12 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.95■■□□□ 1.1
CALR3Q96L12 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.94■■□□□ 1.1
CALR3Q96L12 AC011484.1-201ENST00000377652 1995 ntBASIC21.94■■□□□ 1.1
CALR3Q96L12 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CALR3Q96L12 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CALR3Q96L12 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CALR3Q96L12 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.94■■□□□ 1.1
CALR3Q96L12 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.94■■□□□ 1.1
CALR3Q96L12 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.94■■□□□ 1.1
CALR3Q96L12 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CALR3Q96L12 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CALR3Q96L12 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.94■■□□□ 1.1
CALR3Q96L12 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CALR3Q96L12 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CALR3Q96L12 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CALR3Q96L12 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CALR3Q96L12 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CALR3Q96L12 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
CALR3Q96L12 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CALR3Q96L12 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CALR3Q96L12 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CALR3Q96L12 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.93■■□□□ 1.1
CALR3Q96L12 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.93■■□□□ 1.1
CALR3Q96L12 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CALR3Q96L12 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CALR3Q96L12 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.93■■□□□ 1.1
CALR3Q96L12 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CALR3Q96L12 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.93■■□□□ 1.1
CALR3Q96L12 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.93■■□□□ 1.1
CALR3Q96L12 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.93■■□□□ 1.1
CALR3Q96L12 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.92■■□□□ 1.1
CALR3Q96L12 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CALR3Q96L12 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CALR3Q96L12 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CALR3Q96L12 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CALR3Q96L12 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CALR3Q96L12 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CALR3Q96L12 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.92■■□□□ 1.1
CALR3Q96L12 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.92■■□□□ 1.1
CALR3Q96L12 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.92■■□□□ 1.1
CALR3Q96L12 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CALR3Q96L12 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.92■■□□□ 1.1
CALR3Q96L12 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CALR3Q96L12 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CALR3Q96L12 AC012414.1-201ENST00000556676 535 ntBASIC21.92■■□□□ 1.1
CALR3Q96L12 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.92■■□□□ 1.1
CALR3Q96L12 AL355001.2-201ENST00000620617 1191 ntBASIC21.92■■□□□ 1.1
CALR3Q96L12 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.92■■□□□ 1.1
CALR3Q96L12 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CALR3Q96L12 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CALR3Q96L12 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.92■■□□□ 1.1
CALR3Q96L12 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CALR3Q96L12 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.91■■□□□ 1.1
CALR3Q96L12 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.91■■□□□ 1.1
CALR3Q96L12 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.91■■□□□ 1.1
CALR3Q96L12 AC020907.5-201ENST00000624372 1936 ntBASIC21.91■■□□□ 1.1
CALR3Q96L12 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CALR3Q96L12 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CALR3Q96L12 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CALR3Q96L12 PBX2P1-201ENST00000493219 1291 ntBASIC21.91■■□□□ 1.1
CALR3Q96L12 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CALR3Q96L12 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CALR3Q96L12 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CALR3Q96L12 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CALR3Q96L12 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms